RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 RPL27AP46776 148 aaKnown RBP6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 RPL15P61313 204 aaKnown RBP6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 RGS21Q2M5E4 152 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 NMSQ5H8A3 153 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 C18orf65Q6ZTR6 163 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 VSTM2AQ8TAG5 236 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 ZNF431Q8TF32 576 aaPredicted RBP6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 MITD1Q8WV92 249 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 PHB2Q99623 299 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 WNT10AQ9GZT5 417 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 ALX4Q9H161 411 aaPredicted RBP6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 PALMDQ9NP74 551 aa6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 FAM212BQ9NTI7 297 aaPredicted RBP6.92□□□□□ -1.3
SCAMP1-202ENST00000506858 A0A0B4J2A0 478 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 C13orf42A0A1B0GVH6 325 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 A0A1W2PRX2 142 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 PSMB11A5LHX3 300 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 C15orf61A6NNL5 157 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 AP4M1O00189 453 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 MECP2P51608 486 aaKnown RBP6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 FOXL1Q12952 345 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 CXorf66Q5JRM2 361 aaPredicted RBP6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 FOXRED2Q8IWF2 684 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 C12orf45Q8N5I9 185 aaPredicted RBP6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 SGMS2Q8NHU3 365 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 OR10C1Q96KK4 312 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 AIFM2Q9BRQ8 373 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 COMMD5Q9GZQ3 224 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 SHPKQ9UHJ6 478 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 ALG5Q9Y673 324 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 PKD1L1Q8TDX9 2849 aa6.91□□□□□ -1.3
SCAMP1-202ENST00000506858 FAM25EA8MYX2 175 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 KCNAB3O43448 404 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 B3GALNT1O75752 331 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 IFNA17P01571 189 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 IGF1P05019 195 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 IL5P05113 134 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 VDAC1P21796 283 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 PPIFP30405 207 aaKnown RBP6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 CFHR3Q02985 330 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 WT1-ASQ06250 92 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 OXA1LQ15070 435 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 TATDN3Q17R31 274 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 C19orf54Q5BKX5 351 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 LRTM2Q8N967 370 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 OR1L8Q8NGR8 309 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 OR4A5Q8NH83 315 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 COQ8AQ8NI60 647 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 WIPF2Q8TF74 440 aaPredicted RBP6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 WFDC12Q8WWY7 111 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 IL22RA2Q969J5 263 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 OR5B12Q96R08 314 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 CITED2Q99967 270 aaPredicted RBP6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 MAGT1Q9H0U3 335 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 NDUFA4L2Q9NRX3 87 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 ZNF355PQ9NSJ1 428 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 TMEM14BQ9NUH8 114 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 S4R3C0 116 aa6.9□□□□□ -1.3
SCAMP1-202ENST00000506858 NOTCH3Q9UM47 2321 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 IGHV3-21A0A0B4J1V1 117 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 IGLC7A0M8Q6 106 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 DHFRP00374 187 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 RPLP1P05386 114 aaKnown RBP6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 TRAPPC2P0DI81 140 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 TRAPPC2BP0DI82 140 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 SULT1A3P0DMM9 295 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 SULT1A4P0DMN0 295 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 OR13C7P0DN81 318 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 PF4V1P10720 104 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 HSPE1P61604 102 aaKnown RBP6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 KHDC1LQ5JSQ8 128 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 C12orf54Q6X4T0 127 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 LSM10Q969L4 123 aaKnown RBP6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 COA4Q9NYJ1 87 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 GSKIPQ9P0R6 139 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 PRNDQ9UKY0 176 aa6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 FOXA2Q9Y261 457 aaPredicted RBP6.9□□□□□ -1.31
SCAMP1-202ENST00000506858 GOSR2O14653 212 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 ATG12O94817 140 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 IGHV3-11P01762 117 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 MAS1LP35410 378 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 MFAP2P55001 183 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 SRPXP78539 464 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 SMCO1Q147U7 214 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 NSUN5P1Q3KNT7 163 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 C3orf56Q8N813 242 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 MINDY2Q8NBR6 621 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 OR1S1Q8NH92 325 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 CHPT1Q8WUD6 406 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 SPIN2AQ99865 258 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 SPIN2BQ9BPZ2 258 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 DMRT1Q9Y5R6 373 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 CMYA5Q8N3K9 4069 aa6.89□□□□□ -1.31
SCAMP1-202ENST00000506858 C5orf51A6NDU8 294 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 SSNA1O43805 119 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 CREBL2O60519 120 aaPredicted RBP6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 PITX3O75364 302 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 FBXO24O75426 580 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms