RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PRH1P02810 166 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 PAX1P15863 534 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 ZFP36P26651 326 aaKnown RBP6.5□□□□□ -1.37
COL4A5-208ENST00000505728 CD1BP29016 333 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 MAS1LP35410 378 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 CHRNA7P36544 502 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 DSCR9P59020 149 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 RPL8P62917 257 aaKnown RBP6.5□□□□□ -1.37
COL4A5-208ENST00000505728 DLK1P80370 383 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 PAX2Q02962 417 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 SPINK9Q5DT21 86 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 TOR2AQ5JU69 321 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 MINOS1Q5TGZ0 78 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 HCP5Q6MZN7 132 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 ETV3LQ6ZN32 361 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 LFNGQ8NES3 379 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 FAM168AQ92567 244 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 TAF15Q92804 592 aaKnown RBP eCLIP6.5□□□□□ -1.37
COL4A5-208ENST00000505728 PIMREGQ9BSJ6 248 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 COMMD5Q9GZQ3 224 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 SIRPDQ9H106 197 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 PLEKHA3Q9HB20 300 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 UQCC1Q9NVA1 299 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 MINOS1-NBL1R4GNA1 71 aa6.5□□□□□ -1.37
COL4A5-208ENST00000505728 BTBD17A6NE02 478 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 VWC2LB2RUY7 222 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 FNDC10F2Z333 226 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 C17orf112F2Z3M2 114 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 RRHO14718 337 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 MPDU1O75352 247 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 TSPAN15O95858 294 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 HBE1P02100 147 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 MBP02144 154 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 CRYGBP07316 175 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 MDKP21741 143 aaPredicted RBP6.49□□□□□ -1.37
COL4A5-208ENST00000505728 ZP3P21754 424 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 NPY1RP25929 384 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 ATP5J2P56134 94 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 ERHP84090 104 aaKnown RBP6.49□□□□□ -1.37
COL4A5-208ENST00000505728 C2orf83Q53S99 150 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 CLEC2AQ6UVW9 174 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 MRPL41Q8IXM3 137 aaKnown RBP6.49□□□□□ -1.37
COL4A5-208ENST00000505728 MMD2Q8IY49 270 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 SLC24A4Q8NFF2 622 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 FAM213BQ8TBF2 198 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 C10orf105Q8TEF2 133 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 HINT2Q9BX68 163 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 SIRT7Q9NRC8 400 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 NDUFA4L2Q9NRX3 87 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 WDR83OSQ9Y284 106 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 ABCA1O95477 2261 aa6.49□□□□□ -1.37
COL4A5-208ENST00000505728 ZANQ9Y493 2812 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 IGHV3-72A0A0B4J1Y9 119 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 TRAV1-1A0A0B4J248 108 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 UBE2L5PA0A1B0GUS4 154 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 A0A1B0GW64 132 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 A0A1W2PPI3 338 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 PRSS46E5RG02 174 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 CA2P00918 260 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 IFNA4P05014 189 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 H2AFB1P0C5Y9 115 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 FGF7P21781 194 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 SNCAP37840 140 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 DVL1P1P54792 670 aaPredicted RBP6.48□□□□□ -1.37
COL4A5-208ENST00000505728 DLX1P56177 255 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 LGALS4P56470 323 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 RAB2AP61019 212 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 LCN2P80188 198 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 RUNX1Q01196 453 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 ZNF616Q08AN1 781 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 HABP2Q14520 560 aaPredicted RBP6.48□□□□□ -1.37
COL4A5-208ENST00000505728 PSG5Q15238 335 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 KRTAP21-3Q3LHN1 58 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 CCDC144NLQ6NUI1 221 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 VMO1Q7Z5L0 202 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 ZNF709Q8N972 641 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 MBD3L1Q8WWY6 194 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 RSG1Q9BU20 258 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 NPVFQ9HCQ7 196 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 FBXO7Q9Y3I1 522 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 TBL2Q9Y4P3 447 aaKnown RBP6.48□□□□□ -1.37
COL4A5-208ENST00000505728 RFNGQ9Y644 331 aa6.48□□□□□ -1.37
COL4A5-208ENST00000505728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.47□□□□□ -1.373e-8■■□□□ 12.6
COL4A5-208ENST00000505728 TMEM218A2RU14 115 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 RNASEK-C17orf49H0YIS7 233 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 SLC25A17O43808 307 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 TOX4O94842 621 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 CD5P06127 495 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 RNASE2P10153 161 aaKnown RBP6.47□□□□□ -1.37
COL4A5-208ENST00000505728 MYOD1P15172 320 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 HOXB4P17483 251 aaPredicted RBP6.47□□□□□ -1.37
COL4A5-208ENST00000505728 UBE2E1P51965 193 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 SUB1P53999 127 aaKnown RBP eCLIP6.47□□□□□ -1.37
COL4A5-208ENST00000505728 PAX8Q06710 450 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 PEA15Q15121 130 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 PRSS8Q16651 343 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 BSXQ3C1V8 233 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 TMEM41BQ5BJD5 291 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 BPIFCQ8NFQ6 507 aa6.47□□□□□ -1.37
COL4A5-208ENST00000505728 TMEM170AQ8WVE7 144 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms