RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 RAB22AQ9UL26 194 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 UFC1Q9Y3C8 167 aa4.36□□□□□ -1.71
GYPB-204ENST00000504951 RBM7Q9Y580 266 aaKnown RBP4.36□□□□□ -1.71
GYPB-204ENST00000504951 IGHV3-35A0A0C4DH35 117 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 ZNF320A2RRD8 509 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 MFSD2BA6NFX1 497 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 OR4C46A6NHA9 309 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 IFITM5A6NNB3 132 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 C15orf61A6NNL5 157 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 C16orf90A8MZG2 172 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 K7EMT4 169 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 EBAG9O00559 213 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 ARL6IP5O75915 188 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 S1PR2O95136 353 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 ZNF735P0CB33 412 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 PTHLHP12272 177 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 MIFP14174 115 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 HIST1H1BP16401 226 aaKnown RBP4.35□□□□□ -1.71
GYPB-204ENST00000504951 PI3P19957 117 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 FCGR2BP31994 310 aaPredicted RBP4.35□□□□□ -1.71
GYPB-204ENST00000504951 ARL3P36405 182 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 FAM3BP58499 235 aaPredicted RBP4.35□□□□□ -1.71
GYPB-204ENST00000504951 MLLT11Q13015 90 aaPredicted RBP4.35□□□□□ -1.71
GYPB-204ENST00000504951 CBX3Q13185 183 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 ARFRP1Q13795 201 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 BTNL8Q6UX41 500 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 Q6ZS49 121 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 KCTD9Q7L273 389 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 MMD2Q8IY49 270 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 PUSL1Q8N0Z8 303 aaKnown RBP4.35□□□□□ -1.71
GYPB-204ENST00000504951 OR4A5Q8NH83 315 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 NRG4Q8WWG1 115 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 FYTTD1Q96QD9 318 aaKnown RBP4.35□□□□□ -1.71
GYPB-204ENST00000504951 MGLLQ99685 303 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 OR51E2Q9H255 320 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 SLC2A9Q9NRM0 540 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 SPATA2Q9UM82 520 aa4.35□□□□□ -1.71
GYPB-204ENST00000504951 RBMX2Q9Y388 322 aaKnown RBP4.35□□□□□ -1.71
GYPB-204ENST00000504951 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 IGLV11-55A0A075B6I3 123 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 TRAV3A0A0B4J244 114 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 ZNF705EA8MWA4 302 aaPredicted RBP4.34□□□□□ -1.71
GYPB-204ENST00000504951 ANKRD65E5RJM6 399 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 RGS10O43665 173 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 SSX5O60225 188 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 ACTL6BO94805 426 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 KBTBD11O94819 623 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 HLA-DQB1P01920 261 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 CLEC3BP05452 202 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 CD5P06127 495 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 CRHBPP24387 322 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 HLA-DMBP28068 263 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 MAS1LP35410 378 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 RPL27AP46776 148 aaKnown RBP4.34□□□□□ -1.71
GYPB-204ENST00000504951 AQP4P55087 323 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 MRPS15P82914 257 aaKnown RBP4.34□□□□□ -1.71
GYPB-204ENST00000504951 TMEM187Q14656 261 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 TRAM1Q15629 374 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 C1orf134Q5TEV5 83 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 ZNF773Q6PK81 442 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 Q6ZRM9 215 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 SSX9Q7RTT3 188 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 ZNF367Q7RTV3 350 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 TMEM167AQ8TBQ9 72 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 NUDCD2Q8WVJ2 157 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 EEF1AKMT3Q96AZ1 226 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 ZNF414Q96IQ9 312 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 CXorf58Q96LI9 332 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 OR2A7Q96R45 310 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 NDUFAF3Q9BU61 184 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 CCDC90BQ9GZT6 254 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 ATG5Q9H1Y0 275 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 TMPRSS5Q9H3S3 457 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 SCN3BQ9NY72 215 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 TAS2R8Q9NYW2 309 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 UBQLN2Q9UHD9 624 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 OR2W1Q9Y3N9 320 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 ETV7Q9Y603 341 aa4.34□□□□□ -1.71
GYPB-204ENST00000504951 IGHV3OR16-8A0A075B7F1 116 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 TRAV1-2A0A0B4J238 106 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 IGLC7A0M8Q6 106 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 DPPA5A6NC42 116 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 TMEM235A6NFC5 223 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 TNFSF12O43508 249 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 MRPS14O60783 128 aaKnown RBP4.33□□□□□ -1.72
GYPB-204ENST00000504951 DFFBO76075 338 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 DHFRP00374 187 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 RBMY1A1P0DJD3 496 aaKnown RBP4.33□□□□□ -1.72
GYPB-204ENST00000504951 RBMY1CP0DJD4 496 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
GYPB-204ENST00000504951 GADD45AP24522 165 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 PSMA1P25786 263 aaKnown RBP4.33□□□□□ -1.72
GYPB-204ENST00000504951 GPR183P32249 361 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 TALDO1P37837 337 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 SRSF3P84103 164 aaKnown RBP4.33□□□□□ -1.72
GYPB-204ENST00000504951 RBMY1FQ15415 496 aaKnown RBP4.33□□□□□ -1.72
GYPB-204ENST00000504951 CDNFQ49AH0 187 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 ZNF585BQ52M93 769 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 HACD4Q5VWC8 232 aa4.33□□□□□ -1.72
GYPB-204ENST00000504951 MORN3Q6PF18 240 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms