RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 EAF1Q96JC9 268 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-208ENST00000504387 MGST2Q99735 147 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 CHRNA10Q9GZZ6 450 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 OBP2BQ9NPH6 170 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 KCNIP2Q9NS61 270 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 TNRC18O15417 2968 aaPredicted RBP6.34□□□□□ -1.4
NEDD9-208ENST00000504387 BMPR1BO00238 502 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 SAP30O75446 220 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 KLF7O75840 302 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-208ENST00000504387 GCHFRP30047 84 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 GABRA6Q16445 453 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 RPL39P5Q59GN2 51 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 MRPL14Q6P1L8 145 aaKnown RBP6.33□□□□□ -1.4
NEDD9-208ENST00000504387 NIT1Q86X76 327 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 SCCPDHQ8NBX0 429 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 C1QTNF5Q9BXJ0 243 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 LAMA5O15230 3695 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 YLPM1P49750 1951 aaKnown RBP6.33□□□□□ -1.4
NEDD9-208ENST00000504387 PIEZO2Q9H5I5 2752 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 MUC21A0A0G2JKD1 596 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 MUC21A0A140T8X8 626 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 LAMTOR5O43504 91 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 APCSP02743 223 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 IGFBP2P18065 325 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 MUC21Q5SSG8 566 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 UTF1Q5T230 341 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 DCAF12Q5T6F0 453 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 SPATA12Q7Z6I5 190 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 GGNQ86UU5 652 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 TMEM105Q8N8V8 129 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 BCL2L2Q92843 193 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-208ENST00000504387 ASCL2Q99929 193 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 GNG12Q9UBI6 72 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 CDC42EP3Q9UKI2 254 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 PCNX2A6NKB5 2137 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 A0A087X0K7 114 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 TRAV5A0A0B4J249 113 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 M0R1X1 148 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 SRD5A2P31213 254 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 ATP1A1-AS1Q5TC04 95 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 EBLN2Q6P2I7 272 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 SSX8Q7RTT4 187 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 WDR86Q86TI4 376 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 KCNS1Q96KK3 526 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 ZNF331Q9NQX6 463 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-208ENST00000504387 LOXL2Q9Y4K0 774 aa6.33□□□□□ -1.4
NEDD9-208ENST00000504387 EXPH5Q8NEV8 1989 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 CORTO00230 105 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 LYZL6O75951 148 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 APOA2P02652 100 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 CD99P14209 185 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 TNFSF4P23510 183 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 CTRLP40313 264 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 CATR1Q13166 79 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 EFNB3Q15768 340 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 TIGITQ495A1 244 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 TMEM116Q8NCL8 245 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 IMMP1LQ96LU5 166 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 GGTLC1Q9BX51 225 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 PCED1AQ9H1Q7 454 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 GAL3ST2Q9H3Q3 398 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 LSM4Q9Y4Z0 139 aaKnown RBP6.32□□□□□ -1.4
NEDD9-208ENST00000504387 V9GYV3 84 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 IGLV3-32A0A0A0MS00 114 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 FBLL1A6NHQ2 334 aaKnown RBP6.32□□□□□ -1.4
NEDD9-208ENST00000504387 CXorf1O96002 111 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 FABP6P51161 128 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 PRRX1P54821 245 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 Q0VFX4 171 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 FOXE3Q13461 319 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 RNPS1Q15287 305 aaKnown RBP6.32□□□□□ -1.4
NEDD9-208ENST00000504387 IBA57Q5T440 356 aaKnown RBP6.32□□□□□ -1.4
NEDD9-208ENST00000504387 Q6P435 159 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 Q6ZR03 302 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 KLHDC1Q8N7A1 406 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 CT55Q8WUE5 264 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 TIMM9Q9Y5J7 89 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 NCKAP5O14513 1909 aa6.32□□□□□ -1.4
NEDD9-208ENST00000504387 IGHV2OR16-5A0A0B4J2B6 119 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 TMPRSS2O15393 492 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 FKBP2P26885 142 aaKnown RBP6.31□□□□□ -1.4
NEDD9-208ENST00000504387 IL11RAQ14626 422 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 TMEM136Q6ZRR5 245 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 Q8N7P7 452 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 ORAOV1Q8WV07 137 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 NANOS1Q8WY41 292 aaKnown RBP6.31□□□□□ -1.4
NEDD9-208ENST00000504387 CST9LQ9H4G1 147 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 BOKQ9UMX3 212 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-208ENST00000504387 WDR83OSQ9Y284 106 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 CACNA1BQ00975 2339 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 LY6G6EA0A0G2JKS1 128 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 K7ESF4 209 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 AGFG2O95081 481 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 HAND1O96004 215 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 APELAP0DMC3 54 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 BPIFB3P59826 476 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 OR1C1Q15619 314 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 AARDQ4LEZ3 155 aa6.31□□□□□ -1.4
NEDD9-208ENST00000504387 Q5PR19 223 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms