RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 NUP188Q5SRE5 1749 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 XRN1Q8IZH2 1706 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 KDM3BQ7LBC6 1761 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 CACNA1SQ13698 1873 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FER1L6Q2WGJ9 1857 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 CHD4Q14839 1912 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 LOXHD1Q8IVV2 1947 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 MYH10P35580 1976 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 C7orf71A4D174 169 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FAM183AA6NL82 134 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 LYRM9A8MSI8 78 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 GGTLC3B5MD39 225 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF670-ZNF695F2Z2N8 137 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 M0R1X1 148 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TAX1BP3O14907 124 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 NPFFO15130 113 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 CREBL2O60519 120 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATP5LO75964 103 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 CA2P00918 260 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 KRASP01116 189 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FCGR3AP08637 254 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 H2AFZP0C0S5 128 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 SPINK8P0C7L1 97 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 LINC00869P0C866 280 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TRGC1P0CF51 173 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 BCKDHAP12694 445 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 PPIBP23284 216 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 PRTN3P24158 256 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 EDNRAP25101 427 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TSPOP30536 169 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 GRPRP30550 384 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 GPR183P32249 361 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ARL2P36404 184 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 SRP14P37108 136 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ASIPP42127 132 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 REG1BP48304 166 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 MARCKSL1P49006 195 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATP4BP51164 291 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 SSR4P51571 173 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 POLR2JP52435 117 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 NDUFV3P56181 108 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FBXW4P57775 412 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR1D5P58170 312 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF121P58317 390 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM258P61165 79 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 LYZP61626 148 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 PPP1CBP62140 327 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 RPS23P62266 143 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 GNG5P63218 68 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 RPL18AQ02543 176 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 LOXL1Q08397 574 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 Q0VG73 95 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ELOBQ15370 118 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR7A5Q15622 319 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ADIRFQ15847 76 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF74Q16587 644 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 C4orf26Q17RF5 130 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 KLF17Q5JT82 389 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 PAGE3Q5JUK9 113 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FAM27D1Q5T7N8 215 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 C1orf189Q5VU69 101 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 SPATA31B1PQ5VZV4 182 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 AMMECR1LQ6DCA0 310 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF880Q6PDB4 577 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF322Q6U7Q0 402 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 C17orf64Q86WR6 236 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 GAPTQ8N292 157 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC25A45Q8N413 288 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TPRX1Q8N7U7 411 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZDHHC22Q8N966 263 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 WDR31Q8NA23 367 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR4C16Q8NGL9 310 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR2T27Q8NH04 317 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR51H1Q8NH63 302 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TYMSOSQ8TAI1 123 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF502Q8TBZ5 544 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM54Q969K7 222 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 MRPL53Q96EL3 112 aaKnown RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATXN7L3BQ96GX2 97 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 C9orf85Q96MD7 179 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF488Q96MN9 340 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 AP1S3Q96PC3 154 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 SDF2Q99470 211 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ATF6BQ99941 703 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 PMCHL2Q9BQD1 86 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC25A21Q9BQT8 299 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ULBP3Q9BZM4 244 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 GABARAPL1Q9H0R8 117 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 RHOJQ9H4E5 214 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF442Q9H7R0 627 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ST20Q9HBF5 79 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FGF20Q9NP95 211 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 STARD5Q9NSY2 213 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 TMEM106BQ9NUM4 274 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ANAPC11Q9NYG5 84 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FZR1Q9UM11 496 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 FUT9Q9Y231 359 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 VSIG4Q9Y279 399 aa1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF443Q9Y2A4 671 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P17-201ENST00000504195 ZNF256Q9Y2P7 627 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms