RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CST7O76096 145 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 CNIH1O95406 144 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 METTL15P1P0C7V9 234 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 IGHV4-38-2P0DP08 117 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 EXOSC2Q13868 293 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 TNXAQ16473 311 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 NDUFA5Q16718 116 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 C2orf83Q53S99 150 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 SLC25A24Q6NUK1 477 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 ZNF562Q6V9R5 426 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 ETV3LQ6ZN32 361 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 DYNAPQ8N1N2 210 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 TMEM217Q8N7C4 229 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 WFDC11Q8NEX6 87 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 OR1L6Q8NGR2 347 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 SCGB1C1Q8TD33 95 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 SCARB1Q8WTV0 552 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 C17orf50Q8WW18 174 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 RITA1Q96K30 269 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 TMEM68Q96MH6 324 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 OR4C12Q96R67 309 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 RASL11BQ9BPW5 248 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 TMEM147Q9BVK8 224 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 HINT2Q9BX68 163 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 CYTL1Q9NRR1 136 aa6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 PRRC2AP48634 2157 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-202ENST00000503338 DCHS2Q6V1P9 2916 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 A0A0U1RQK1 487 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 BTBD17A6NE02 478 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 MPDU1O75352 247 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 CA2P00918 260 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 FSHBP01225 129 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 HLA-DRB1P01911 266 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 IFNA4P05014 189 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 SEC11BP0C7V7 166 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 CNTFRP26992 372 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 RAB5CP51148 216 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 DLK1P80370 383 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 SLC38A11Q08AI6 406 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 TMEM267Q0VDI3 215 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 SCGB2A2Q13296 93 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 HNF4GQ14541 408 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 CLINT1Q14677 625 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 BSXQ3C1V8 233 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 SPINK9Q5DT21 86 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 KLF17Q5JT82 389 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 RUSC1-AS1Q66K80 236 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 RPL7L1Q6DKI1 246 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 OR8G2PQ6IF36 304 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 ETFRF1Q6IPR1 90 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 BRD3OSQ6XYD6 125 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 ZNF114Q8NC26 417 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 MAPK1IP1LQ8NDC0 245 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 OR5R1Q8NH85 324 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 RNASEH2CQ8TDP1 164 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 SRSF12Q8WXF0 261 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 CACNG8Q8WXS5 425 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 RBM14Q96PK6 669 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 SSX3Q99909 188 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 GINS3Q9BRX5 216 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 SMIM3Q9BZL3 60 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 ARV1Q9H2C2 271 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 SLC25A32Q9H2D1 315 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 UQCC1Q9NVA1 299 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 MOB4Q9Y3A3 225 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 CREBBPQ92793 2442 aa6.49□□□□□ -1.37
TOPBP1-202ENST00000503338 FASNP49327 2511 aaKnown RBP6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 ABCA2Q9BZC7 2435 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 IGHV3OR16-10A0A075B7F0 116 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 RPS10-NUDT3A0A1W2PQS6 291 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 PMS2P5A8MQ11 134 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 CD5LO43866 347 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 AVPP01185 164 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 OR13C7P0DN81 318 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 HNF1AP20823 631 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 GNB1P62873 340 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 FXYD3Q14802 87 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 MRGPRG-AS1Q2M3A8 158 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 VWC2Q2TAL6 325 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 Q8N9W7 124 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 OR1P1Q8NH06 330 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 ARPC1AQ92747 370 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 TPSG1Q9NRR2 321 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 KCNIP2Q9NS61 270 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 ABCA12Q86UK0 2595 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 TNCP24821 2201 aa6.48□□□□□ -1.37
TOPBP1-202ENST00000503338 IGLC7A0M8Q6 106 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 CGB1A6NKQ9 187 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 UMAD1C9J7I0 102 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 C17orf112F2Z3M2 114 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 CFDP00746 253 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 OPN1MWP04001 364 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 OPN1MW2P0DN77 364 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 OPN1MW3P0DN78 364 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 RNASE2P10153 161 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 SPP1P10451 314 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 CD24P25063 80 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 GPX4P36969 197 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 CX3CL1P78423 397 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms