RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 APELAP0DMC3 54 aa16.09■□□□□ 0.17
CDC42SE2-206ENST00000503291 GIPP09681 153 aaPredicted RBP16.09■□□□□ 0.17
CDC42SE2-206ENST00000503291 POLR2GP62487 172 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDC42SE2-206ENST00000503291 RAB32Q13637 225 aa16.09■□□□□ 0.17
CDC42SE2-206ENST00000503291 RBKSQ9H477 322 aa16.09■□□□□ 0.17
CDC42SE2-206ENST00000503291 CEBPZOSA8MTT3 80 aa16.08■□□□□ 0.16
CDC42SE2-206ENST00000503291 TEX22C9J3V5 150 aa16.08■□□□□ 0.16
CDC42SE2-206ENST00000503291 LRRC37A5PQ49AS3 106 aa16.08■□□□□ 0.16
CDC42SE2-206ENST00000503291 Q6ZSV7 163 aa16.08■□□□□ 0.16
CDC42SE2-206ENST00000503291 SGMS2Q8NHU3 365 aa16.08■□□□□ 0.16
CDC42SE2-206ENST00000503291 PPP1R1CQ8WVI7 109 aa16.08■□□□□ 0.16
CDC42SE2-206ENST00000503291 Q8N2B8 174 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 LFNGQ8NES3 379 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 ASB13Q8WXK3 278 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 PLEKHA3Q9HB20 300 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 LINC00527Q9UJ94 153 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 SETD2Q9BYW2 2564 aaPredicted RBP16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 SYNGR2O43760 224 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 MED6O75586 246 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 IGF1P05019 195 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 TMEM95Q3KNT9 176 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 ARSJQ5FYB0 599 aaPredicted RBP16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 RANGRFQ9HD47 186 aaPredicted RBP16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 LSM5Q9Y4Y9 91 aaKnown RBP16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 WSB1Q9Y6I7 421 aa16.07■□□□□ 0.16
CDC42SE2-206ENST00000503291 IGLC7A0M8Q6 106 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 K7EPK0 472 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 WRBO00258 174 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 TSPAN9O75954 239 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 HOXA1P49639 335 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 S100A10P60903 97 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 RAP2BP61225 183 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 WT1-ASQ06250 92 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 DTD1Q8TEA8 209 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 NOL4LQ96MY1 436 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 A0A1W2PN81 502 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 AP4M1O00189 453 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 AREGP15514 252 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 PSMB6P28072 239 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 CHRNA7P36544 502 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 ASPHD1Q5U4P2 390 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 C11orf87Q6NUJ2 197 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 ENY2Q9NPA8 101 aa16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 RCL1Q9Y2P8 373 aaKnown RBP16.06■□□□□ 0.16
CDC42SE2-206ENST00000503291 G3V318 75 aa16.05■□□□□ 0.16
CDC42SE2-206ENST00000503291 SSSCA1O60232 199 aa16.05■□□□□ 0.16
CDC42SE2-206ENST00000503291 CCNKO75909 580 aa16.05■□□□□ 0.16
CDC42SE2-206ENST00000503291 OR13C7P0DN81 318 aa16.05■□□□□ 0.16
CDC42SE2-206ENST00000503291 VDAC2P45880 294 aaPredicted RBP16.05■□□□□ 0.16
CDC42SE2-206ENST00000503291 ECSCRQ19T08 205 aa16.05■□□□□ 0.16
CDC42SE2-206ENST00000503291 SRSF8Q9BRL6 282 aaKnown RBP16.05■□□□□ 0.16
CDC42SE2-206ENST00000503291 ZFP57Q9NU63 452 aa16.05■□□□□ 0.16
CDC42SE2-206ENST00000503291 IAPPP10997 89 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 CRIP2P52943 208 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 TMEM267Q0VDI3 215 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 AKIRIN2Q53H80 203 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 UNQ5815/PRO19632Q6UWF5 114 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 OR2T35Q8NGX2 323 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 OR2T6Q8NHC8 308 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 ST6GAL2Q96JF0 529 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 HIPK2Q9H2X6 1198 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 HEYLQ9NQ87 328 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 INS-IGF2F8WCM5 200 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 MPC2O95563 127 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 REG1AP05451 166 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 ERHP84090 104 aaKnown RBP16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 Q5BKY6 102 aa16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 HSD17B13Q7Z5P4 300 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE2-206ENST00000503291 TRAV41A0A0B4J266 112 aa16.03■□□□□ 0.16
CDC42SE2-206ENST00000503291 AKAP14Q86UN6 197 aa16.03■□□□□ 0.16
CDC42SE2-206ENST00000503291 STPG2Q8N412 459 aa16.03■□□□□ 0.16
CDC42SE2-206ENST00000503291 SERTAD4Q9NUC0 356 aa16.03■□□□□ 0.16
CDC42SE2-206ENST00000503291 C2CD3Q4AC94 2353 aa16.03■□□□□ 0.16
CDC42SE2-206ENST00000503291 H0YIZ8 118 aa16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 DEDDO75618 318 aa16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 TMEM50AO95807 157 aa16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 RLN2P04090 185 aa16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 MRPL41Q8IXM3 137 aaKnown RBP16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 OR2C3Q8N628 320 aa16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 TMEM68Q96MH6 324 aa16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 CIB3Q96Q77 187 aaPredicted RBP16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 RAB40CQ96S21 281 aa16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 RNF126Q9BV68 326 aa16.02■□□□□ 0.16
CDC42SE2-206ENST00000503291 PAX9P55771 341 aa16.02■□□□□ 0.15
CDC42SE2-206ENST00000503291 C19orf54Q5BKX5 351 aa16.02■□□□□ 0.15
CDC42SE2-206ENST00000503291 OR5T1Q8NG75 326 aa16.02■□□□□ 0.15
CDC42SE2-206ENST00000503291 OR5AC2Q9NZP5 309 aa16.02■□□□□ 0.15
CDC42SE2-206ENST00000503291 ZNF580Q9UK33 172 aa16.02■□□□□ 0.15
CDC42SE2-206ENST00000503291 SNCAP37840 140 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 FGL1Q08830 312 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 TTC9CQ8N5M4 171 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 NEURL2Q9BR09 285 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 C11orf1Q9H5F2 150 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 C16orf95Q9H693 158 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 TRAV14DV4A0A0A6YYC5 116 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 SMLR1H3BR10 107 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 NDUFA7O95182 113 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 CTRB1P17538 263 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 CTRB2Q6GPI1 263 aa16.01■□□□□ 0.15
CDC42SE2-206ENST00000503291 C19orf35Q6ZS72 473 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms