RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 BEST4Q8NFU0 473 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 OR5AP2Q8NGF4 316 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 OR5B3Q8NH48 314 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 NRG4Q8WWG1 115 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 CACNG8Q8WXS5 425 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 OR10C1Q96KK4 312 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 TXN2Q99757 166 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 C6orf62Q9GZU0 229 aaPredicted RBP4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 MFFQ9GZY8 342 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 C11orf68Q9H3H3 251 aaKnown RBP4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 MAP6D1Q9H9H5 199 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 CCL28Q9NRJ3 127 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 NDUFA4L2Q9NRX3 87 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 TXNL4BQ9NX01 149 aaKnown RBP4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 RHBDL2Q9NX52 303 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 FKBP11Q9NYL4 201 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 ELF5Q9UKW6 265 aaPredicted RBP4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 RAB26Q9ULW5 256 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 SPATA2Q9UM82 520 aa4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 F11RQ9Y624 299 aaKnown RBP4.52□□□□□ -1.69
LSM3P4-201ENST00000502948 TRAV2A0A0B4J234 112 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 CXorf65A6NEN9 183 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 MARCH11A6NNE9 402 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 F8W735 103 aaPredicted RBP4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 SCAF4O95104 1147 aaKnown RBP4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 LY6G6CO95867 125 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 TRAPPC2P0DI81 140 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 TRAPPC2BP0DI82 140 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 F2RP25116 425 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 FCGR2CP31995 323 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 GPR183P32249 361 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 RELQ04864 619 aaPredicted RBP4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 WT1-ASQ06250 92 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 OR2B11Q5JQS5 317 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 C22orf42Q6IC83 251 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 ZNF818PQ6ZRF7 136 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 CROCCP3Q8IVE0 287 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 OR1L8Q8NGR8 309 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 OR1P1Q8NH06 330 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 SCARB1Q8WTV0 552 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 NUDCD2Q8WVJ2 157 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 LSM10Q969L4 123 aaKnown RBP4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 TMEM56Q96MV1 263 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 TSC22D3Q99576 134 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 YTHDF1Q9BYJ9 559 aaKnown RBP4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 HRH4Q9H3N8 390 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 HRASLSQ9HDD0 168 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 TMEM140Q9NV12 185 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 ANAPC10Q9UM13 185 aa4.51□□□□□ -1.69
LSM3P4-201ENST00000502948 TEX50A0A1B0GTY4 177 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 INS-IGF2F8WCM5 200 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 K7EIM0 57 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 XRCC3O43542 346 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 DFFBO76075 338 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 IGHV3-23P01764 117 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 CTSGP08311 255 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 NAT1P18440 290 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 GNRHRP30968 328 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 EWSR1Q01844 656 aaKnown RBP eCLIP4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 DEFB135Q30KP9 77 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 TMEM41BQ5BJD5 291 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 FAM90A2PQ658T7 463 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 C19orf35Q6ZS72 473 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 SSX9Q7RTT3 188 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 SPARTQ8N0X7 666 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 DMBX1Q8NFW5 382 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 LGALS14Q8TCE9 139 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 SECTM1Q8WVN6 248 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 MOB3AQ96BX8 217 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 DGCR14Q96DF8 476 aaKnown RBP4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 SLC5A7Q9GZV3 580 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 CSTL1Q9H114 145 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 AUNIPQ9H7T9 357 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 DIABLOQ9NR28 239 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 TMEM14BQ9NUH8 114 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 C21orf62Q9NYP8 219 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 SMPXQ9UHP9 88 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 DAPK2Q9UIK4 370 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 PRNDQ9UKY0 176 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 SSR3Q9UNL2 185 aa4.5□□□□□ -1.69
LSM3P4-201ENST00000502948 TRAV3A0A0B4J244 114 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 IGHV7-4-1A0A0J9YVY3 117 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 MPTX1A8MV57 137 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 C11orf94C9JXX5 98 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 J3QRK9 145 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 SULT1C2O00338 296 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 CHEK1O14757 476 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 REG1AP05451 166 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 OR13C7P0DN81 318 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 SDC2P34741 201 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 MFAP2P55001 183 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 ERVK-16P61578 105 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 PVRIGQ6DKI7 326 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 SLC25A24Q6NUK1 477 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 IZUMO2Q6UXV1 221 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 CMTM1Q8IZ96 169 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 GVQW1Q8N7I0 195 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 OR10W1Q8NGF6 305 aa4.49□□□□□ -1.69
LSM3P4-201ENST00000502948 PHLDA1Q8WV24 401 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms