RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 CNN1P51911 297 aaKnown RBP13.62□□□□□ -0.23
ZCCHC3-201ENST00000500893 LOXL3P58215 753 aa13.62□□□□□ -0.23
ZCCHC3-201ENST00000500893 FXYD3Q14802 87 aa13.62□□□□□ -0.23
ZCCHC3-201ENST00000500893 CCL17Q92583 94 aa13.62□□□□□ -0.23
ZCCHC3-201ENST00000500893 CXorf1O96002 111 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 GZMBP10144 247 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 CENPVQ7Z7K6 275 aaPredicted RBP13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 OR10G8Q8NGN5 311 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 TMEM170AQ8WVE7 144 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 TMEM18Q96B42 140 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 C14orf144Q96I85 54 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 SLC35D1Q9NTN3 355 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 EFNB3Q15768 340 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 PARD6GQ9BYG4 376 aaPredicted RBP13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 RNF7Q9UBF6 113 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 DSCAMO60469 2012 aa13.61□□□□□ -0.23
ZCCHC3-201ENST00000500893 KLK10O43240 276 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 YPEL1O60688 119 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 CCL3L1P16619 93 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 GCHFRP30047 84 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 HLA-DRB5Q30154 266 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 MBNL2Q5VZF2 373 aaKnown RBP13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 TRAT1Q6PIZ9 186 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 DOLPP1Q86YN1 238 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 YPEL2Q96QA6 119 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 NCOR2Q9Y618 2525 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 CRYBB3P26998 211 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 IER3P46695 156 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 PKIAP61925 76 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 TCTEX1D1Q8N7M0 179 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 C1orf162Q8NEQ5 155 aaPredicted RBP13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 FAM103A1Q9BTL3 118 aaKnown RBP13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 PLAUP00749 431 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 FRMD6-AS1P0C7T7 363 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 VDAC2P45880 294 aaPredicted RBP13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 HSPE1P61604 102 aaKnown RBP13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 RHOBP62745 196 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 KIAA1644Q3SXP7 199 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 UHRF2Q96PU4 802 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 ASCL3Q9NQ33 180 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 RPH3ALQ9UNE2 315 aa13.6□□□□□ -0.23
ZCCHC3-201ENST00000500893 IGLV1-44P01699 117 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 CHRNB4P30926 498 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 OR10J1P30954 320 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 TIMP3P35625 211 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 OPRK1P41145 380 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 SGK494Q96LW2 274 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 KCNIP2Q9NS61 270 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 SPTBN4Q9H254 2564 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 IGHV3-72A0A0B4J1Y9 119 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 KBTBD11-OT1A0A1B0GTJ5 212 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 PRB4P10163 310 aaPredicted RBP13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 Q8N7P7 452 aa13.59□□□□□ -0.23
ZCCHC3-201ENST00000500893 IGHV3-21A0A0B4J1V1 117 aa13.58□□□□□ -0.23
ZCCHC3-201ENST00000500893 ENSAO43768 121 aaKnown RBP13.58□□□□□ -0.23
ZCCHC3-201ENST00000500893 SUMO1P63165 101 aaKnown RBP13.58□□□□□ -0.23
ZCCHC3-201ENST00000500893 C17orf58Q2M2W7 97 aa13.58□□□□□ -0.23
ZCCHC3-201ENST00000500893 CYB5R2Q6BCY4 276 aa13.58□□□□□ -0.23
ZCCHC3-201ENST00000500893 BAGE3Q86Y29 109 aa13.58□□□□□ -0.23
ZCCHC3-201ENST00000500893 BAGE2Q86Y30 109 aa13.58□□□□□ -0.23
ZCCHC3-201ENST00000500893 OR9G1Q8NH87 305 aa13.58□□□□□ -0.23
ZCCHC3-201ENST00000500893 OR4A8P0C604 315 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 TNFSF4P23510 183 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 DLX1P56177 255 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 C15orf61A6NNL5 157 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 NUPR1O60356 82 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 REG1AP05451 166 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 STAG3L2P0CL84 134 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 STAG3L3P0CL85 134 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 GLRXP35754 106 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 RAB7AP51149 207 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 C10orf55Q5SWW7 151 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 ZNF664Q8N3J9 261 aa13.58□□□□□ -0.24
ZCCHC3-201ENST00000500893 FCN1O00602 326 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 SRP14P37108 136 aaKnown RBP13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 GUSBP1Q15486 140 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 PQLC2Q6ZP29 291 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 MS4A10Q96PG2 267 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 COMMD5Q9GZQ3 224 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 IDI2-AS1Q9NZ38 188 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 TET2Q6N021 2002 aaPredicted RBP13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 VENTXO95231 258 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 IGHV1-46P01743 117 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 JOSD1Q15040 202 aaPredicted RBP13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 OR8I2Q8N0Y5 310 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 CISD2Q8N5K1 135 aaKnown RBP13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 SAMD10Q9BYL1 202 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 RNASE7Q9H1E1 156 aaKnown RBP13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 CHD8Q9HCK8 2581 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 SRRM4A7MD48 611 aaKnown RBP13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 ADMP35318 185 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 VWC2Q2TAL6 325 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 NABP2Q9BQ15 211 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 FAM215AQ9Y5M1 114 aa13.57□□□□□ -0.24
ZCCHC3-201ENST00000500893 MPDU1O75352 247 aa13.56□□□□□ -0.24
ZCCHC3-201ENST00000500893 MT-CO2P00403 227 aa13.56□□□□□ -0.24
ZCCHC3-201ENST00000500893 RTL8BQ17RB0 113 aa13.56□□□□□ -0.24
ZCCHC3-201ENST00000500893 ACTL10Q5JWF8 245 aa13.56□□□□□ -0.24
ZCCHC3-201ENST00000500893 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms