RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 EIF5A2Q9GZV4 153 aaKnown RBP3.63□□□□□ -1.83
SSR3-209ENST00000498205 ZNF442Q9H7R0 627 aa3.63□□□□□ -1.83
SSR3-209ENST00000498205 ZNF665Q9H7R5 613 aa3.63□□□□□ -1.83
SSR3-209ENST00000498205 ELL3Q9HB65 397 aaPredicted RBP3.63□□□□□ -1.83
SSR3-209ENST00000498205 ZMAT5Q9UDW3 170 aaKnown RBP3.63□□□□□ -1.83
SSR3-209ENST00000498205 POLDIP2Q9Y2S7 368 aa3.63□□□□□ -1.83
SSR3-209ENST00000498205 FREM1Q5H8C1 2179 aa3.63□□□□□ -1.83
SSR3-209ENST00000498205 KMT2EQ8IZD2 1858 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 IGSF23A1L1A6 192 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 SMCO3A2RU48 225 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 NKX2-6A6NCS4 301 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 ZNF729A6NN14 1252 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 CD300LBA8K4G0 201 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 H3BQ15 152 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 CLDN34H7C241 214 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 ITGB1BP1O14713 200 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 HSD17B6O14756 317 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 HMGB3O15347 200 aaKnown RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 RBFOX2O43251 390 aaKnown RBP eCLIP3.62□□□□□ -1.83
SSR3-209ENST00000498205 SYNGR2O43760 224 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 ANGPTL7O43827 346 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 CXCL13O43927 109 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 MPDU1O75352 247 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 PGLYRP1O75594 196 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 VENTXO95231 258 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 CYB5R3P00387 301 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 IFNA10P01566 189 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 TYMSP04818 313 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 FBP1P09467 338 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 BCL2P10415 239 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 B4GALT1P15291 398 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 ZNF14P17017 642 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 KLK2P20151 261 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 MDKP21741 143 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 NFYBP25208 207 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 AKR1D1P51857 326 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 ATP5IP56385 69 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 LCN2P80188 198 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 HERPUD1Q15011 391 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 IGFBP7Q16270 282 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 LRRC75BQ2VPJ9 315 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 PIGYQ3MUY2 71 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 LEMD1Q68G75 181 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 TMEM14EPQ6UXP3 125 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 ZNF818PQ6ZRF7 136 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 LINC00696Q6ZRV3 163 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 CYP2G1PQ6ZSU1 146 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 MRPL21Q7Z2W9 205 aaKnown RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 CALHM1Q8IU99 346 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 FAM58AQ8N1B3 248 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 OR56B2PQ8NGI1 322 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 OR5C1Q8NGR4 320 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 OR2AE1Q8NHA4 323 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 OR10J5Q8NHC4 309 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 MRPL30Q8TCC3 161 aaKnown RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 RNASEH2CQ8TDP1 164 aaKnown RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 CD300LFQ8TDQ1 290 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 ITLN1Q8WWA0 313 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 APH1AQ96BI3 265 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 DNAJA3Q96EY1 480 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 IMMP2LQ96T52 175 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 SPAG8Q99932 426 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 HDHD3Q9BSH5 251 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 GGACTQ9BVM4 153 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 MAGT1Q9H0U3 335 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 OR51I2Q9H344 312 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 CALHM2Q9HA72 323 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 HES4Q9HCC6 221 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 MANBALQ9NQG1 85 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 KCNIP1Q9NZI2 227 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 TAAR3PQ9P1P4 343 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 KLF13Q9Y2Y9 288 aaPredicted RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 NOSIPQ9Y314 301 aaKnown RBP3.62□□□□□ -1.83
SSR3-209ENST00000498205 ARL2-SNX15V9GYD0 113 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 CACNA1HO95180 2353 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 UNC80Q8N2C7 3258 aa3.62□□□□□ -1.83
SSR3-209ENST00000498205 DNAH14Q0VDD8 3507 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 CACNA1DQ01668 2161 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 REV3LO60673 3130 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 TRAV9-1A0A075B6T8 112 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 IGKV1-6A0A0C4DH72 117 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 ANKRD30BLA7E2S9 258 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 FNDC10F2Z333 226 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 G3V3Y1 287 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 M0R036 132 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 CHST1O43916 411 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 NME2P1O60361 137 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 KBTBD11O94819 623 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 TNFSF15O95150 251 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 SYNGR4O95473 234 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 PTBP3O95758 552 aaKnown RBP3.61□□□□□ -1.83
SSR3-209ENST00000498205 TMEM50AO95807 157 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 SERPINE2P07093 398 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 FABP1P07148 127 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 PGA5P0DJD9 388 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 HIST1H1BP16401 226 aaKnown RBP3.61□□□□□ -1.83
SSR3-209ENST00000498205 PPP1CCP36873 323 aaKnown RBP3.61□□□□□ -1.83
SSR3-209ENST00000498205 CFHR2P36980 270 aa3.61□□□□□ -1.83
SSR3-209ENST00000498205 CEACAM6P40199 344 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms