RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 HBZP02008 142 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 TNFSF4P23510 183 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 RPS16P62249 146 aaKnown RBP9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 RAB1CQ92928 201 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 ACY3Q96HD9 319 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 CACNG5Q9UF02 275 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 IGHV1-46P01743 117 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 SERPINE2P07093 398 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 FBXL19-AS1Q494R0 122 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 ZNF66Q6ZN08 573 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 HAPLN4Q86UW8 402 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 MTURNQ8N3F0 131 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 OR4P4Q8NGL7 312 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 OR1L1Q8NH94 360 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 GATAD1Q8WUU5 269 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 SDSLQ96GA7 329 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 SMIM7Q9BQ49 75 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 CLN8Q9UBY8 286 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 DUSP13Q9UII6 198 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 METRNQ9UJH8 293 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 CEP250Q9BV73 2442 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 AKAP13Q12802 2813 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 TRBV7-9A0A0J9YWB2 115 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 KIAA1324LA8MWY0 1029 aaPredicted RBP9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 GNG7O60262 68 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 OR7C2O60412 319 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 AESQ08117 197 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 TEX36Q5VZQ5 186 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 DRAM1Q8N682 238 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 TRBV24-1A0A075B6N3 115 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 F2RL2O00254 374 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 RBFOX2O43251 390 aaKnown RBP eCLIP9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 CKS1BP61024 79 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 TMEM30BQ3MIR4 351 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 PRR30Q53SZ7 412 aaPredicted RBP9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 SPANXN5Q5MJ07 72 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 ITLN1Q8WWA0 313 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 TBX15Q96SF7 602 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 CITED1Q99966 193 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 FAM234AQ9H0X4 552 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 PSENENQ9NZ42 101 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 RNF7Q9UBF6 113 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 SLC45A2Q9UMX9 530 aa9.56□□□□□ -0.88
SNRNP200-208ENST00000497539 RIF1Q5UIP0 2472 aaKnown RBP9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 IGHV3-64DA0A0J9YX35 117 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 A0A1B0GW15 77 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 MAP1LC3B2A6NCE7 125 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 DPRXA6NFQ7 191 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 OR11H12B2RN74 326 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 IGKV1-39P01597 117 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 IGKV1D-39P04432 117 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 P0C879 139 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 CGB3P0DN86 165 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 CGB7P0DN87 165 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 DEFA4P12838 97 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 ZNF585BQ52M93 769 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 STUMQ69YW2 141 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 MOGAT3Q86VF5 341 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 OR52L2PQ8NGH6 319 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 OR13A1Q8NGR1 328 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 OR11H2Q8NH07 326 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 RND1Q92730 232 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 OR4C12Q96R67 309 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 SSBP4Q9BWG4 385 aaPredicted RBP9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 MAP1LC3BQ9GZQ8 125 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 JPT1Q9UK76 154 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 LAMTOR2Q9Y2Q5 125 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 TRAV1-1A0A0B4J248 108 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 ODAMA1E959 279 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 FAM87AP0C7U9 286 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 PSG1P11464 419 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 SPRNQ5BIV9 151 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 NIT1Q86X76 327 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 ZNF525Q8N782 197 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 LHX4Q969G2 390 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 LINC00574Q9H8X3 128 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 GCM1Q9NP62 436 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 RAB9BQ9NP90 201 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 PPIAL4AQ9Y536 164 aa9.55□□□□□ -0.88
SNRNP200-208ENST00000497539 UBE2L5PA0A1B0GUS4 154 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 FAM90A26D6RGX4 464 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 SPINT2O43291 252 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 YPEL1O60688 119 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 PFN1P07737 140 aaKnown RBP9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 GABRA2P47869 451 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 SSBP2P81877 361 aaPredicted RBP9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 TNFAIP6P98066 277 aaPredicted RBP9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 KLRB1Q12918 225 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 TMEM183BQ1AE95 376 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 TCTEX1D4Q5JR98 221 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 OR10G4Q8NGN3 311 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 C5orf30Q96GV9 206 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 SFRP2Q96HF1 295 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 YPEL2Q96QA6 119 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 SLC39A9Q9NUM3 307 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 TMEM242Q9NWH2 141 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms