RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 HCP5Q6MZN7 132 aa12.74□□□□□ -0.37
RPN1-207ENST00000497289 RITA1Q96K30 269 aa12.74□□□□□ -0.37
RPN1-207ENST00000497289 CARHSP1Q9Y2V2 147 aaKnown RBP12.74□□□□□ -0.37
RPN1-207ENST00000497289 IGHV2-70DA0A0C4DH43 119 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 ERHP84090 104 aaKnown RBP12.73□□□□□ -0.37
RPN1-207ENST00000497289 C2orf83Q53S99 150 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 SP5Q6BEB4 398 aaPredicted RBP12.73□□□□□ -0.37
RPN1-207ENST00000497289 ACSM6Q6P461 480 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 TREML4Q6UXN2 200 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 SCRT1Q9BWW7 348 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 UNKLQ9H9P5 680 aaKnown RBP12.73□□□□□ -0.37
RPN1-207ENST00000497289 SOX15O60248 233 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 LMO4P61968 165 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 CCL20P78556 96 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 BSXQ3C1V8 233 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 FFAR4Q5NUL3 377 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 MMD2Q8IY49 270 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 MBD3L1Q8WWY6 194 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 RCC1LQ96I51 464 aaKnown RBP12.73□□□□□ -0.37
RPN1-207ENST00000497289 RNF5Q99942 180 aa12.73□□□□□ -0.37
RPN1-207ENST00000497289 FAM157AC9JC47 383 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 FNDC10F2Z333 226 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 RNASE2P10153 161 aaKnown RBP12.72□□□□□ -0.37
RPN1-207ENST00000497289 PAX2Q02962 417 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 PSG5Q15238 335 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 ZNF726P1Q15940 193 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 ZNF787Q6DD87 383 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 SVBPQ8N300 66 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 OR10W1Q8NGF6 305 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 PIMREGQ9BSJ6 248 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 SIRPDQ9H106 197 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 NPVFQ9HCQ7 196 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 TPSG1Q9NRR2 321 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 TNCP24821 2201 aa12.72□□□□□ -0.37
RPN1-207ENST00000497289 CRYGBP07316 175 aa12.71□□□□□ -0.37
RPN1-207ENST00000497289 HOXB4P17483 251 aaPredicted RBP12.71□□□□□ -0.37
RPN1-207ENST00000497289 LDLRAD2Q5SZI1 272 aa12.71□□□□□ -0.37
RPN1-207ENST00000497289 DOPEY1Q5JWR5 2465 aa12.71□□□□□ -0.37
RPN1-207ENST00000497289 RBFOX3A6NFN3 312 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 C9JQL5 133 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 TIMM23O14925 209 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 FOXH1O75593 365 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 CNTFRP26992 372 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 MAS1LP35410 378 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 PPT1P50897 306 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.38
RPN1-207ENST00000497289 MRPL41Q8IXM3 137 aaKnown RBP12.71□□□□□ -0.38
RPN1-207ENST00000497289 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 FAM168AQ92567 244 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 KCNIP2Q9NS61 270 aa12.71□□□□□ -0.38
RPN1-207ENST00000497289 FLNCQ14315 2725 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 MAP1LC3B2A6NCE7 125 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 CGB1A6NKQ9 187 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 PRSS8Q16651 343 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 MRGPRG-AS1Q2M3A8 158 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 ACOT6Q3I5F7 207 aaPredicted RBP12.7□□□□□ -0.38
RPN1-207ENST00000497289 C10orf55Q5SWW7 151 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 LCN15Q6UWW0 184 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 SSX7Q7RTT5 188 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 MAP1LC3BQ9GZQ8 125 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 METTL1Q9UBP6 276 aaKnown RBP12.7□□□□□ -0.38
RPN1-207ENST00000497289 SIGLEC9Q9Y336 463 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 HILPDAQ9Y5L2 63 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 CTXND1A0A1B0GTU2 59 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 E7EUB6 86 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 NDUFS8O00217 210 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 ACTL6BO94805 426 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 VENTXO95231 258 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 OPRK1P41145 380 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 TEPPQ6URK8 271 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 LHFPL4Q7Z7J7 247 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 RPP25LQ8N5L8 163 aaKnown RBP12.7□□□□□ -0.38
RPN1-207ENST00000497289 MGST2Q99735 147 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 SLC39A9Q9NUM3 307 aa12.7□□□□□ -0.38
RPN1-207ENST00000497289 OOSP1A8MZH6 123 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 TOX4O94842 621 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 COX6B1P14854 86 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 SUB1P53999 127 aaKnown RBP eCLIP12.69□□□□□ -0.388e-10■■■■■ 49.3
RPN1-207ENST00000497289 HABP2Q14520 560 aaPredicted RBP12.69□□□□□ -0.38
RPN1-207ENST00000497289 TNXAQ16473 311 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 GUCA2BQ16661 112 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 MINOS1Q5TGZ0 78 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 CCDC144NLQ6NUI1 221 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 CFHR4Q92496 578 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 GGTLC1Q9BX51 225 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 NKX6-2Q9C056 277 aaPredicted RBP12.69□□□□□ -0.38
RPN1-207ENST00000497289 ACTR3CQ9C0K3 210 aaPredicted RBP12.69□□□□□ -0.38
RPN1-207ENST00000497289 LSM4Q9Y4Z0 139 aaKnown RBP12.69□□□□□ -0.38
RPN1-207ENST00000497289 MINOS1-NBL1R4GNA1 71 aa12.69□□□□□ -0.38
RPN1-207ENST00000497289 A0A1W2PRD5 423 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 A0A1W2PRF3 423 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 A0A1W2PRM7 423 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 RPL27AP46776 148 aaKnown RBP12.68□□□□□ -0.38
RPN1-207ENST00000497289 ATP5J2P56134 94 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 LGALS4P56470 323 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms