RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 OR1L8Q8NGR8 309 aa6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 TMEM167AQ8TBQ9 72 aa6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 OR4F4Q96R69 305 aa6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 HEYLQ9NQ87 328 aaPredicted RBP6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 PARP11Q9NR21 331 aa6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 TPSG1Q9NRR2 321 aa6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 BET1LQ9NYM9 111 aa6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 LINC00527Q9UJ94 153 aa6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 WSB1Q9Y6I7 421 aa6.46□□□□□ -1.38
SMARCD3-215ENST00000496530 ST8SIA3O43173 380 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 PFDN1O60925 122 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 MED6O75586 246 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 CCNKO75909 580 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 IGHG2P01859 326 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 CRYGBP07316 175 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 IAPPP10997 89 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 CXCL3P19876 107 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 MAS1LP35410 378 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 SNCAP37840 140 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 NKX2-1P43699 371 aaPredicted RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 RPL27AP46776 148 aaKnown RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 CX3CL1P78423 397 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 ERHP84090 104 aaKnown RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 SRSF4Q08170 494 aaKnown RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 TMEM267Q0VDI3 215 aaPredicted RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 NSUN5P1Q3KNT7 163 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 ZNF562Q6V9R5 426 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 PUSL1Q8N0Z8 303 aaKnown RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 Q8N6K4 173 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 OR11H7Q8NGC8 314 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 WDR89Q96FK6 387 aaPredicted RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 FAM103A1Q9BTL3 118 aaKnown RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 ZNF436Q9C0F3 470 aaPredicted RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 WNT10AQ9GZT5 417 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 HIPK2Q9H2X6 1198 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 RBKSQ9H477 322 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 ZC4H2Q9NQZ6 224 aa6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 TSSC4Q9Y5U2 329 aaPredicted RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 FBN1P35555 2871 aaKnown RBP6.45□□□□□ -1.38
SMARCD3-215ENST00000496530 TCRBV4S1A1TA0A5B7 111 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 DBX1A6NMT0 343 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 NDUFA3O95167 84 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 SPDEFO95238 335 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 IFNA10P01566 189 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 PF4P02776 101 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 REG1AP05451 166 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 FGF2P09038 288 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 PF4V1P10720 104 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 CD28P10747 220 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 DEFA4P12838 97 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 PVALBP20472 110 aaPredicted RBP6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 PSMB6P28072 239 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 HOXA1P49639 335 aaPredicted RBP6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 KRTAP10-3P60369 221 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 SPCS3P61009 180 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 POLR2GP62487 172 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 TMEM95Q3KNT9 176 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 NMSQ5H8A3 153 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 C10orf55Q5SWW7 151 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 SLC25A24Q6NUK1 477 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 TEX38Q6PEX7 206 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 UNQ5815/PRO19632Q6UWF5 114 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 Q6ZS46 218 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 STPG2Q8N412 459 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 LFNGQ8NES3 379 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 OR10W1Q8NGF6 305 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 CHAC2Q8WUX2 184 aa6.44□□□□□ -1.38
SMARCD3-215ENST00000496530 MXRA5Q9NR99 2828 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 ATRQ13535 2644 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 IGHV7-81A0A0B4J1V7 117 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 E7EUB6 86 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 SMLR1H3BR10 107 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 LCE2BO14633 110 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 SYNGR2O43760 224 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 SSSCA1O60232 199 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 MBPP02686 304 aaPredicted RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 AMY1AP04745 511 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 IL6RP08887 468 aaPredicted RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 NUP62P37198 522 aaPredicted RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 SUB1P53999 127 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 RPL23AP62750 156 aaKnown RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 RPP30P78346 268 aaKnown RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 RAB32Q13637 225 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 POU2AF1Q16633 256 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 ECSCRQ19T08 205 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 SPANXN5Q5MJ07 72 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 TMEM65Q6PI78 240 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 FAM71E2Q8N5Q1 922 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 OR5M8Q8NGP6 311 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 FAM110DQ8TAY7 271 aaPredicted RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 THAP6Q8TBB0 222 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 ARPC1AQ92747 370 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 NOL4LQ96MY1 436 aaPredicted RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 MS4A10Q96PG2 267 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 CITED2Q99967 270 aaPredicted RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 HSPB9Q9BQS6 159 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 PLEKHA3Q9HB20 300 aa6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 RANGRFQ9HD47 186 aaPredicted RBP6.43□□□□□ -1.38
SMARCD3-215ENST00000496530 ZFP57Q9NU63 452 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms