RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PLP1P60201 277 aa7.57□□□□□ -1.2
HPS4-217ENST00000496385 TFF3Q07654 80 aa7.57□□□□□ -1.2
HPS4-217ENST00000496385 WDR74Q6RFH5 385 aaPredicted RBP7.57□□□□□ -1.2
HPS4-217ENST00000496385 DTX1Q86Y01 620 aa7.57□□□□□ -1.2
HPS4-217ENST00000496385 OR2K2Q8NGT1 345 aa7.57□□□□□ -1.2
HPS4-217ENST00000496385 OR2D2Q9H210 308 aa7.57□□□□□ -1.2
HPS4-217ENST00000496385 CLEC5AQ9NY25 188 aa7.57□□□□□ -1.2
HPS4-217ENST00000496385 COPS7AQ9UBW8 275 aa7.57□□□□□ -1.2
HPS4-217ENST00000496385 RARRES3Q9UL19 164 aa7.57□□□□□ -1.2
HPS4-217ENST00000496385 TPRP12270 2363 aaKnown RBP7.56□□□□□ -1.2
HPS4-217ENST00000496385 AHCTF1Q8WYP5 2266 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.56□□□□□ -1.2
HPS4-217ENST00000496385 J3QR89 54 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 OR5AL1P0C617 328 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 FRMD6-AS1P0C7T7 363 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 ARL4DP49703 201 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 HSD52Q0P140 79 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 ZNF585BQ52M93 769 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 Q5PR19 223 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 FAM69BQ5VUD6 431 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 PLCXD3Q63HM9 321 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 LINC00596Q86U02 117 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 NPFFR1Q9GZQ6 430 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 LOXL2Q9Y4K0 774 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 DSPP15924 2871 aaKnown RBP7.56□□□□□ -1.2
HPS4-217ENST00000496385 A0A0G2JMM0 328 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 A0A1W2PPB8 328 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 PSMB11A5LHX3 300 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 KIR3DP1A8MWS1 328 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 CRYGSP22914 178 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 RAB31Q13636 194 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 DAZAP2Q15038 168 aaPredicted RBP7.56□□□□□ -1.2
HPS4-217ENST00000496385 IZUMO4Q1ZYL8 232 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 CD300EQ496F6 205 aaPredicted RBP7.56□□□□□ -1.2
HPS4-217ENST00000496385 FGFRL1Q8N441 504 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 Q8N7P7 452 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 DPF1Q92782 380 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 TMEM45BQ96B21 275 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 CHCHD1Q96BP2 118 aaKnown RBP7.56□□□□□ -1.2
HPS4-217ENST00000496385 TNFRSF19Q9NS68 423 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
HPS4-217ENST00000496385 MTCH1Q9NZJ7 389 aa7.56□□□□□ -1.2
HPS4-217ENST00000496385 APC2O95996 2303 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 SYS1-DBNDD2H3BUS1 97 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 USF1P22415 310 aaPredicted RBP7.55□□□□□ -1.2
HPS4-217ENST00000496385 GNG4P50150 75 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 FGF12P61328 243 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 TMEM97Q5BJF2 176 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 C19orf25Q9UFG5 118 aaPredicted RBP7.55□□□□□ -1.2
HPS4-217ENST00000496385 ERRFI1Q9UJM3 462 aaPredicted RBP7.55□□□□□ -1.2
HPS4-217ENST00000496385 H3BMH7 237 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 ARL14EPLP0DKL9 152 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 GATA2P23769 480 aaPredicted RBP7.55□□□□□ -1.2
HPS4-217ENST00000496385 TIGITQ495A1 244 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 CARD17Q5XLA6 110 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 S100A7AQ86SG5 101 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 SPACA3Q8IXA5 215 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 ZBTB34Q8NCN2 500 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 OR1F12Q8NHA8 337 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 VSTM2AQ8TAG5 236 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 FAM222BQ8WU58 562 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 TMEM54Q969K7 222 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 NABP1Q96AH0 204 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 PLEK2Q9NYT0 353 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 ZNF835Q9Y2P0 537 aa7.55□□□□□ -1.2
HPS4-217ENST00000496385 LRRC30A6NM36 301 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 C22orf46C9J442 243 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 RAB29O14966 203 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 HBZP02008 142 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 COX8AP10176 69 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 HTR1DP28221 377 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 RAB9AP51151 201 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 FOXL2P58012 376 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 CKS1BP61024 79 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 FA2HQ7L5A8 372 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 GRAMD2BQ96HH9 432 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 ACACAQ13085 2346 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 ANKRD11Q6UB99 2663 aaPredicted RBP7.54□□□□□ -1.2
HPS4-217ENST00000496385 TRAV38-1A0A0B4J264 116 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 HELTA6NFD8 242 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 H3BML4 177 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 WISP2O76076 250 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 P0C879 139 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 GCHFRP30047 84 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 C5orf64Q2M2E5 130 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 ZNF611Q8N823 705 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 OR10AG1Q8NH19 301 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 FGF21Q9NSA1 209 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 KCNIP1Q9NZI2 227 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 MGAQ8IWI9 3026 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 ADAMTS20P59510 1910 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 NCOA6Q14686 2063 aaPredicted RBP7.54□□□□□ -1.2
HPS4-217ENST00000496385 ACACBO00763 2458 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 FAM27BQ5VT28 67 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 OR2AE1Q8NHA4 323 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 FER1L6-AS2Q96M78 137 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
HPS4-217ENST00000496385 FNDC4Q9H6D8 234 aaPredicted RBP7.54□□□□□ -1.2
HPS4-217ENST00000496385 IGLV3-32A0A0A0MS00 114 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms