RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 UFC1Q9Y3C8 167 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 IGHV3OR16-8A0A075B7F1 116 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 TEX50A0A1B0GTY4 177 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 CXorf65A6NEN9 183 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 OR13C7P0DN81 318 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 MFAP2P55001 183 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 ELLP55199 621 aaPredicted RBP9.68□□□□□ -0.86
USF1-207ENST00000496363 SCAND1P57086 179 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 DEFB135Q30KP9 77 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 OR2C3Q8N628 320 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 GDPD1Q8N9F7 314 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 OR5AP2Q8NGF4 316 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 GIMAP1Q8WWP7 306 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 SRSF8Q9BRL6 282 aaKnown RBP9.68□□□□□ -0.86
USF1-207ENST00000496363 HINT2Q9BX68 163 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 PLEKHA2Q9HB19 425 aa9.68□□□□□ -0.86
USF1-207ENST00000496363 A0A0A6YYH2 397 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 A6NJ64 397 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 ZNF207O43670 478 aaKnown RBP9.67□□□□□ -0.86
USF1-207ENST00000496363 RLN1P04808 185 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 TRAPPC2P0DI81 140 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 TRAPPC2BP0DI82 140 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 GNRHRP30968 328 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 TGFBR1P36897 503 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 HERV-K104P61576 105 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 ODF3L2Q3SX64 289 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 SLC25A24Q6NUK1 477 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 VN1R17PQ8TDU5 208 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 SPAG8Q99932 426 aaPredicted RBP9.67□□□□□ -0.86
USF1-207ENST00000496363 CHRDL1Q9BU40 450 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 C5orf66Q9H5L9 145 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 DIABLOQ9NR28 239 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 EHFQ9NZC4 300 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 COMMD9Q9P000 198 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 THYN1Q9P016 225 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 NSG2Q9Y328 171 aa9.67□□□□□ -0.86
USF1-207ENST00000496363 MARCH11A6NNE9 402 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 F8W735 103 aaPredicted RBP9.66□□□□□ -0.86
USF1-207ENST00000496363 SPRY2O43597 315 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 LY6G6CO95867 125 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 SERPINE2P07093 398 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 RPL35AP18077 110 aaKnown RBP9.66□□□□□ -0.86
USF1-207ENST00000496363 RFX2P48378 723 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 ERVK-16P61578 105 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 NEDD8Q15843 81 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 LYG2Q86SG7 212 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 SLC38A6Q8IZM9 456 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 OR1L8Q8NGR8 309 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 CD300LFQ8TDQ1 290 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 C20orf24Q9BUV8 137 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 FXYD6Q9H0Q3 95 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 IFT46Q9NQC8 304 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 NDUFA4L2Q9NRX3 87 aa9.66□□□□□ -0.86
USF1-207ENST00000496363 TSPAN4O14817 238 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 PGLYRP1O75594 196 aaPredicted RBP9.65□□□□□ -0.86
USF1-207ENST00000496363 ATP6V1G2O95670 118 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 PMP2P02689 132 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 F2RP25116 425 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 ADMP35318 185 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 G6PCP35575 357 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 LPAR6P43657 344 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 CBX5P45973 191 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 APOC4P55056 127 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 THOC7Q6I9Y2 204 aaKnown RBP9.65□□□□□ -0.86
USF1-207ENST00000496363 WFDC3Q8IUB2 231 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 UBAC2Q8NBM4 344 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 SCARB1Q8WTV0 552 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 FCAMRQ8WWV6 532 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 MOB3AQ96BX8 217 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 BSCL2Q96G97 398 aaPredicted RBP9.65□□□□□ -0.86
USF1-207ENST00000496363 ZNF414Q96IQ9 312 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 ZNF2Q9BSG1 426 aaPredicted RBP9.65□□□□□ -0.86
USF1-207ENST00000496363 DAZ1Q9NQZ3 744 aaKnown RBP9.65□□□□□ -0.86
USF1-207ENST00000496363 C21orf62Q9NYP8 219 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 OR51B2Q9Y5P1 312 aa9.65□□□□□ -0.86
USF1-207ENST00000496363 F11RQ9Y624 299 aaKnown RBP9.65□□□□□ -0.86
USF1-207ENST00000496363 DBX1A6NMT0 343 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 K7EIM0 57 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 NDUFA4O00483 81 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 CYB5BO43169 146 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 XRCC3O43542 346 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 KRASP01116 189 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 FGF2P09038 288 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 BMI1P35226 326 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 TNFRSF9Q07011 255 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 Q6ZWC4 215 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 HSD17B13Q7Z5P4 300 aaPredicted RBP9.64□□□□□ -0.87
USF1-207ENST00000496363 LSM10Q969L4 123 aaKnown RBP9.64□□□□□ -0.87
USF1-207ENST00000496363 YTHDF1Q9BYJ9 559 aaKnown RBP9.64□□□□□ -0.87
USF1-207ENST00000496363 Q9H521 79 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 ANAPC10Q9UM13 185 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 TP53TG1Q9Y2A0 90 aa9.64□□□□□ -0.87
USF1-207ENST00000496363 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
USF1-207ENST00000496363 CTSDP07339 412 aaPredicted RBP9.63□□□□□ -0.87
USF1-207ENST00000496363 TAS2R20P59543 309 aa9.63□□□□□ -0.87
USF1-207ENST00000496363 ZNF124Q15973 351 aa9.63□□□□□ -0.87
USF1-207ENST00000496363 Q56UQ5 140 aa9.63□□□□□ -0.87
USF1-207ENST00000496363 LAMTOR1Q6IAA8 161 aa9.63□□□□□ -0.87
USF1-207ENST00000496363 SPSB3Q6PJ21 355 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms