RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 NBEAL2Q6ZNJ1 2754 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 MFSD2BA6NFX1 497 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 SERPINE2P07093 398 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 OR13C7P0DN81 318 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 ZNF585BQ52M93 769 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 MZT2AQ6P582 158 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 PLET1Q6UQ28 207 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 SNX29P2Q8IUI4 249 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 UXS1Q8NBZ7 420 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 OR10W1Q8NGF6 305 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 ZNF502Q8TBZ5 544 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 VN1R17PQ8TDU5 208 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 FCAMRQ8WWV6 532 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 HINT2Q9BX68 163 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 PALMDQ9NP74 551 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 NDUFA4L2Q9NRX3 87 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 FKBP11Q9NYL4 201 aa9.62□□□□□ -0.87
PTPRF-214ENST00000496043 CD7P09564 240 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 ELK1P19419 428 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 EDN2P20800 178 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 RCVRNP35243 200 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 G6PCP35575 357 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 ZNF57Q68EA5 555 aaPredicted RBP9.61□□□□□ -0.87
PTPRF-214ENST00000496043 LINC00322Q6ZN03 302 aaPredicted RBP9.61□□□□□ -0.87
PTPRF-214ENST00000496043 GDPD1Q8N9F7 314 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 MARC2Q969Z3 335 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 TSC22D3Q99576 134 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 PLEKHA3Q9HB20 300 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 ZC4H2Q9NQZ6 224 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 FAM212BQ9NTI7 297 aaPredicted RBP9.61□□□□□ -0.87
PTPRF-214ENST00000496043 PRNDQ9UKY0 176 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 OR51B2Q9Y5P1 312 aa9.61□□□□□ -0.87
PTPRF-214ENST00000496043 A8MWP6 167 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 OR11H12B2RN74 326 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 FAM25AB3EWG3 89 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 FAM25CB3EWG5 89 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 FAM25GB3EWG6 89 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 HPGDSO60760 199 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 GPR183P32249 361 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 ELLP55199 621 aaPredicted RBP9.6□□□□□ -0.87
PTPRF-214ENST00000496043 UCP3P55916 312 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 WT1-ASQ06250 92 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 ANKRD55Q3KP44 614 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 PHLDA2Q53GA4 152 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 TM4SF20Q53R12 229 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 SLC16A13Q7RTY0 426 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 DEFB125Q8N687 156 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 OR1L6Q8NGR2 347 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 LSM10Q969L4 123 aaKnown RBP9.6□□□□□ -0.87
PTPRF-214ENST00000496043 ISOC1Q96CN7 298 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 WDR89Q96FK6 387 aaPredicted RBP9.6□□□□□ -0.87
PTPRF-214ENST00000496043 TMEM56Q96MV1 263 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 FXYD6Q9H0Q3 95 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 MRPL27Q9P0M9 148 aaKnown RBP9.6□□□□□ -0.87
PTPRF-214ENST00000496043 NSG2Q9Y328 171 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 UFC1Q9Y3C8 167 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 CEPT1Q9Y6K0 416 aa9.6□□□□□ -0.87
PTPRF-214ENST00000496043 STAB2Q8WWQ8 2551 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 TMEM213A2RRL7 107 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 C8orf88P0DMB2 117 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 ZNF182P17025 639 aaPredicted RBP9.59□□□□□ -0.87
PTPRF-214ENST00000496043 TBC1D26Q86UD7 250 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 SLC38A6Q8IZM9 456 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 OR5B3Q8NH48 314 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 CACNG8Q8WXS5 425 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 AP3S1Q92572 193 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 ATP6V0BQ99437 205 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 MLXQ9UH92 298 aa9.59□□□□□ -0.87
PTPRF-214ENST00000496043 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
PTPRF-214ENST00000496043 TRAV25A0A0B4J276 109 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 IGHV3-35A0A0C4DH35 117 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 RBMY1BA6NDE4 496 aaKnown RBP9.58□□□□□ -0.88
PTPRF-214ENST00000496043 RBMY1EA6NEQ0 496 aaKnown RBP9.58□□□□□ -0.88
PTPRF-214ENST00000496043 TGOLN2O43493 480 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 RBMY1DP0C7P1 496 aaKnown RBP9.58□□□□□ -0.88
PTPRF-214ENST00000496043 SPSB3Q6PJ21 355 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 RBPMS2Q6ZRY4 209 aaKnown RBP9.58□□□□□ -0.88
PTPRF-214ENST00000496043 H2BFWTQ7Z2G1 175 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 TMEM61Q8N0U2 210 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 OR52B4Q8NGK2 314 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 OR4A16Q8NH70 328 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 ZNF436Q9C0F3 470 aaPredicted RBP9.58□□□□□ -0.88
PTPRF-214ENST00000496043 HIPK2Q9H2X6 1198 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 SRD5A3Q9H8P0 318 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 SELENOKQ9Y6D0 94 aa9.58□□□□□ -0.88
PTPRF-214ENST00000496043 OR2T8A6NH00 312 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 M0QYG6 137 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 SCAF4O95104 1147 aaKnown RBP9.57□□□□□ -0.88
PTPRF-214ENST00000496043 CTF1Q16619 201 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 BTNL8Q6UX41 500 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 SCARB1Q8WTV0 552 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 C15orf40Q8WUR7 153 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 BSCL2Q96G97 398 aaPredicted RBP9.57□□□□□ -0.88
PTPRF-214ENST00000496043 SEC22AQ96IW7 307 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 NAA50Q9GZZ1 169 aaKnown RBP9.57□□□□□ -0.88
PTPRF-214ENST00000496043 TMEM14BQ9NUH8 114 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 C21orf62Q9NYP8 219 aa9.57□□□□□ -0.88
PTPRF-214ENST00000496043 KLK11Q9UBX7 282 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms