RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 PRR20CP86479 221 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 PRR20DP86480 221 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 PRR20BP86481 221 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 PRR20AP86496 221 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 SLC25A24Q6NUK1 477 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 HSD17B13Q7Z5P4 300 aaPredicted RBP12.9□□□□□ -0.34
TMEM53-209ENST00000495630 GDPD1Q8N9F7 314 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 CD300LFQ8TDQ1 290 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 C2CD4CQ8TF44 421 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 NUDCD2Q8WVJ2 157 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 C20orf24Q9BUV8 137 aa12.9□□□□□ -0.34
TMEM53-209ENST00000495630 TRDV1A0A1B0GX56 115 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 C15orf62A8K5M9 175 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 APRG1Q8IVJ8 170 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 OR10W1Q8NGF6 305 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 SECTM1Q8WVN6 248 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 CHRDL1Q9BU40 450 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 C11orf68Q9H3H3 251 aaKnown RBP12.89□□□□□ -0.35
TMEM53-209ENST00000495630 FBXL17Q9UF56 701 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 SMPXQ9UHP9 88 aa12.89□□□□□ -0.35
TMEM53-209ENST00000495630 TMEM235A6NFC5 223 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 SULT1C2O00338 296 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 SSX5O60225 188 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 OR13C7P0DN81 318 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 FCGR2CP31995 323 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 CATR1Q13166 79 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 NR2C2APQ86WQ0 139 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 OR11H2Q8NH07 326 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 C21orf62Q9NYP8 219 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
TMEM53-209ENST00000495630 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 ZNF773Q6PK81 442 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 ZNF367Q7RTV3 350 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 DMBX1Q8NFW5 382 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 OR1L8Q8NGR8 309 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 OR13F1Q8NGS4 319 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 SCARB1Q8WTV0 552 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 RNF2Q99496 336 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 TMEM140Q9NV12 185 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 NDUFB11Q9NX14 153 aa12.87□□□□□ -0.35
TMEM53-209ENST00000495630 F11RQ9Y624 299 aaKnown RBP12.87□□□□□ -0.35
TMEM53-209ENST00000495630 PCLOQ9Y6V0 5065 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 NOTOA8MTQ0 251 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 CHEK1O14757 476 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
TMEM53-209ENST00000495630 PPYP01298 95 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 ARPC4P59998 168 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 BEST4Q8NFU0 473 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 SLC5A7Q9GZV3 580 aa12.86□□□□□ -0.35
TMEM53-209ENST00000495630 IGHV3OR16-8A0A075B7F1 116 aa12.85□□□□□ -0.35
TMEM53-209ENST00000495630 F8W735 103 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-209ENST00000495630 MRPS14O60783 128 aaKnown RBP12.85□□□□□ -0.35
TMEM53-209ENST00000495630 CTSGP08311 255 aa12.85□□□□□ -0.35
TMEM53-209ENST00000495630 MFAP2P55001 183 aa12.85□□□□□ -0.35
TMEM53-209ENST00000495630 TBCEQ15813 527 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-209ENST00000495630 ZNF124Q15973 351 aa12.85□□□□□ -0.35
TMEM53-209ENST00000495630 C22orf42Q6IC83 251 aa12.85□□□□□ -0.35
TMEM53-209ENST00000495630 NDUFA4L2Q9NRX3 87 aa12.85□□□□□ -0.35
TMEM53-209ENST00000495630 HECTD4Q9Y4D8 3996 aa12.85□□□□□ -0.35
TMEM53-209ENST00000495630 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 IGHV7-4-1A0A0J9YVY3 117 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 RELQ04864 619 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-209ENST00000495630 Q56UQ5 140 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 HOGA1Q86XE5 327 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 CADM3Q8N126 398 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 TMEM116Q8NCL8 245 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 GIMAP1Q8WWP7 306 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 LSM10Q969L4 123 aaKnown RBP12.84□□□□□ -0.35
TMEM53-209ENST00000495630 CMTM3Q96MX0 182 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 COMMD9Q9P000 198 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 APLNQ9ULZ1 77 aa12.84□□□□□ -0.35
TMEM53-209ENST00000495630 IGLL5B9A064 214 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 C11orf94C9JXX5 98 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 K7EIM0 57 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 CD5P06127 495 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 PTHLHP12272 177 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 TFPI2P48307 235 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 ERVK-16P61578 105 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 PAFAH1B2P68402 229 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 TMEM187Q14656 261 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 FAM90A2PQ658T7 463 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 OR10C1Q96KK4 312 aa12.83□□□□□ -0.36
TMEM53-209ENST00000495630 TRAV14DV4A0A0A6YYC5 116 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 SMIM30A4D0T7 59 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 NUPL2O15504 423 aaKnown RBP12.82□□□□□ -0.36
TMEM53-209ENST00000495630 AQP4P55087 323 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 ZNF818PQ6ZRF7 136 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 TPRA1Q86W33 373 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 GVQW1Q8N7I0 195 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 OR51H1Q8NH63 302 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 BORCS5Q969J3 196 aa12.82□□□□□ -0.36
TMEM53-209ENST00000495630 DGCR14Q96DF8 476 aaKnown RBP12.82□□□□□ -0.36
TMEM53-209ENST00000495630 HRH4Q9H3N8 390 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms