RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 OR56B4Q8NH76 319 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 OR10J5Q8NHC4 309 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 BORCS5Q969J3 196 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 ZNF714Q96N38 554 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 LITAFQ99732 161 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 HRASLSQ9HDD0 168 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 OR2S2Q9NQN1 319 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 MCUBQ9NWR8 336 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 TAS2R8Q9NYW2 309 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 TAS2R3Q9NYW6 316 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 CALYQ9NYX4 217 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 IDI2-AS1Q9NZ38 188 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 EHFQ9NZC4 300 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 MGAT4AQ9UM21 535 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 COL7A1Q02388 2944 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
VIM-207ENST00000495528 DYNC2H1Q8NCM8 4307 aaKnown RBP4.97□□□□□ -1.61
VIM-207ENST00000495528 IGKV1-6A0A0C4DH72 117 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 A0A1W2PPE3 182 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 CENPXA8MT69 81 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 DISC1C4P0D8 188 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 ATP6V0E1O15342 81 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 CTXN2P0C2S0 81 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 ZNF735P0CB33 412 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 OR5H8P0DN80 308 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 NFYAP23511 347 aaPredicted RBP4.97□□□□□ -1.61
VIM-207ENST00000495528 ZBTB25P24278 435 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 HTR1DP28221 377 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 FCGR2CP31995 323 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 PPP1CCP36873 323 aaKnown RBP4.97□□□□□ -1.61
VIM-207ENST00000495528 NKX2-1P43699 371 aaPredicted RBP4.97□□□□□ -1.61
VIM-207ENST00000495528 TAS2R46P59540 309 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 AP3S2P59780 193 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 GNB1P62873 340 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 HLA-DRB3P79483 266 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 ZNF415Q09FC8 603 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 GNMTQ14749 295 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 SCGB2B2Q4G0G5 96 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 MORN2Q502X0 79 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 RNASE10Q5GAN6 216 aaKnown RBP4.97□□□□□ -1.61
VIM-207ENST00000495528 UTF1Q5T230 341 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 DHRS11Q6UWP2 260 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 HEPN1Q6WQI6 88 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 Q6ZS49 121 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 MOB1BQ7L9L4 216 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 OR4C16Q8NGL9 310 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 OR6F1Q8NGZ6 308 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 LEAP2Q969E1 77 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 AKR1E2Q96JD6 320 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 RBM14Q96PK6 669 aaKnown RBP4.97□□□□□ -1.61
VIM-207ENST00000495528 GINS4Q9BRT9 223 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 CLEC7AQ9BXN2 247 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 TMEM133Q9H2Q1 129 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 GAL3ST2Q9H3Q3 398 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 RAB9BQ9NP90 201 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 OR1A1Q9P1Q5 309 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 ANAPC10Q9UM13 185 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 RBM7Q9Y580 266 aaKnown RBP4.97□□□□□ -1.61
VIM-207ENST00000495528 U3KQK5 164 aa4.97□□□□□ -1.61
VIM-207ENST00000495528 SACSQ9NZJ4 4579 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.62
VIM-207ENST00000495528 TRBV6-7A0A0A0MS04 114 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 PSMB11A5LHX3 300 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 TOR1AO14656 332 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 LYRM1O43325 122 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 YPEL1O60688 119 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 OR2F2O95006 317 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 GAS8-AS1O95177 125 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 APOHP02749 345 aaPredicted RBP4.96□□□□□ -1.62
VIM-207ENST00000495528 CD74P04233 296 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 OR8U9P0C7N5 309 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 AADACP22760 399 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 BRS3P32247 399 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 FAUP35544 74 aaKnown RBP4.96□□□□□ -1.62
VIM-207ENST00000495528 MYCNOSP40205 109 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 GNG10P50151 68 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 CCR6P51684 374 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 FXYD4P59646 89 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 RPL23AP62750 156 aaKnown RBP4.96□□□□□ -1.62
VIM-207ENST00000495528 HTD2P86397 168 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 MEF2DQ14814 521 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 ACTBL2Q562R1 376 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 TMEM17Q86X19 198 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 ABHD12Q8N2K0 398 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 OR10A7Q8NGE5 316 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 OR51S1Q8NGJ8 323 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 OR52M1Q8NGK5 317 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 OR8U1Q8NH10 309 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 TERB2Q8NHR7 220 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 CAPSLQ8WWF8 208 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 GIMAP1Q8WWP7 306 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 CREB3L1Q96BA8 519 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 YPEL2Q96QA6 119 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 ASCL2Q99929 193 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 ZNF2Q9BSG1 426 aaPredicted RBP4.96□□□□□ -1.62
VIM-207ENST00000495528 MCRIP2Q9BUT9 160 aaKnown RBP4.96□□□□□ -1.62
VIM-207ENST00000495528 GPR61Q9BZJ8 451 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 PARP12Q9H0J9 701 aaKnown RBP4.96□□□□□ -1.62
VIM-207ENST00000495528 LINC00574Q9H8X3 128 aa4.96□□□□□ -1.62
VIM-207ENST00000495528 RDH8Q9NYR8 311 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms