RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PALMDQ9NP74 551 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 COA4Q9NYJ1 87 aa13.38□□□□□ -0.27
HDAC6-235ENST00000495515 HMX3A6NHT5 357 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 TEX22C9J3V5 150 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 SOX15O60248 233 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 BRI3O95415 125 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 DUS4LO95620 317 aaKnown RBP13.37□□□□□ -0.27
HDAC6-235ENST00000495515 APELAP0DMC3 54 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 MYOD1P15172 320 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 RAB9AP51151 201 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 HSPE1P61604 102 aaKnown RBP13.37□□□□□ -0.27
HDAC6-235ENST00000495515 ASPHD1Q5U4P2 390 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 PLET1Q6UQ28 207 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 DUSP18Q8NEJ0 188 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 NDUFA4L2Q9NRX3 87 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-235ENST00000495515 PRR13Q9NZ81 148 aa13.37□□□□□ -0.27
HDAC6-235ENST00000495515 TENM1Q9UKZ4 2725 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 A0A0B4J293 547 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 NPIPB5A8MRT5 1133 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 E7EUB6 86 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 CYB5BO43169 146 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
HDAC6-235ENST00000495515 SULT1A3P0DMM9 295 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 SULT1A4P0DMN0 295 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 MECP2P51608 486 aaKnown RBP13.36□□□□□ -0.27
HDAC6-235ENST00000495515 RPL23AP62750 156 aaKnown RBP13.36□□□□□ -0.27
HDAC6-235ENST00000495515 IZUMO4Q1ZYL8 232 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 NSUN5P1Q3KNT7 163 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 ANKRD55Q3KP44 614 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 LYZL2Q7Z4W2 148 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 NRARPQ7Z6K4 114 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 GPR146Q96CH1 333 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 CACNG5Q9UF02 275 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 TMED3Q9Y3Q3 217 aa13.36□□□□□ -0.27
HDAC6-235ENST00000495515 A0A1W2PRX2 142 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 NUDT19A8MXV4 375 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 PLXNB1O43157 2135 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 IFNA17P01571 189 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 TRGV3P03979 118 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 PSMB6P28072 239 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 CDX1P47902 265 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-235ENST00000495515 TPPP2P59282 170 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 OR4F17Q8NGA8 305 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 MS4A10Q96PG2 267 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 OR4F4Q96R69 305 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 KLK15Q9H2R5 256 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 TNCP24821 2201 aa13.35□□□□□ -0.27
HDAC6-235ENST00000495515 A0A0G2JLM5 398 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 A0A0G2JRQ6 117 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 A0A1B0GU03 582 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 A0A1B0GW64 132 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 IGLC7A0M8Q6 106 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 CGB1A6NKQ9 187 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 DBX1A6NMT0 343 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 ST8SIA3O43173 380 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 IFNA21P01568 189 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 CRYGCP07315 174 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 OR13C7P0DN81 318 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 DEFA4P12838 97 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 AREGP15514 252 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 PRCDQ00LT1 54 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 SMCO1Q147U7 214 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 NMSQ5H8A3 153 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 LCNL1Q6ZST4 164 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 MYOZ3Q8TDC0 251 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 PLEKHA3Q9HB20 300 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 ENY2Q9NPA8 101 aa13.34□□□□□ -0.27
HDAC6-235ENST00000495515 IL5P05113 134 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 SLC25A6P12236 298 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 HIST1H1BP16401 226 aaKnown RBP13.33□□□□□ -0.28
HDAC6-235ENST00000495515 CTRB1P17538 263 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 SPCS3P61009 180 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 ERHP84090 104 aaKnown RBP13.33□□□□□ -0.28
HDAC6-235ENST00000495515 DCTN2Q13561 401 aaKnown RBP13.33□□□□□ -0.28
HDAC6-235ENST00000495515 AARDQ4LEZ3 155 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 CTRB2Q6GPI1 263 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 Q6ZRM9 215 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 KLHL30-AS1Q8NEE0 82 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 OR10W1Q8NGF6 305 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 ZNF431Q8TF32 576 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-235ENST00000495515 MITD1Q8WV92 249 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 USMG5Q96IX5 58 aa13.33□□□□□ -0.28
HDAC6-235ENST00000495515 GPN1Q9HCN4 374 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-235ENST00000495515 C13orf42A0A1B0GVH6 325 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 FAM223BA6NKX1 122 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 ADARB2-AS1A8MUL3 147 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 INMT-MINDY4F8WBC2 141 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 PRAF2O60831 178 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 PTTG1O95997 202 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 HOXB5P09067 269 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 HIST2H2BDQ6DRA6 164 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 FAM223AQ8IWN6 122 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 OR1L6Q8NGR2 347 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 OR1S1Q8NH92 325 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 C4orf3Q8WVX3 66 aa13.32□□□□□ -0.28
HDAC6-235ENST00000495515 THYN1Q9P016 225 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms