RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 WASHC3Q9Y3C0 194 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 FBXO7Q9Y3I1 522 aa13.2□□□□□ -0.3
CBX4-204ENST00000495122 C15orf62A8K5M9 175 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 LY6HO94772 140 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 LIPFP07098 398 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 USF1P22415 310 aaPredicted RBP13.19□□□□□ -0.3
CBX4-204ENST00000495122 HOXA1P49639 335 aaPredicted RBP13.19□□□□□ -0.3
CBX4-204ENST00000495122 OR2B8PP59922 312 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 PMS2P11Q13670 270 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 UTF1Q5T230 341 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 OR8G2PQ6IF36 304 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 SSX9Q7RTT3 188 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 TGIF2LXQ8IUE1 241 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 C11orf42Q8N5U0 333 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 LHX4Q969G2 390 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 ZDHHC16Q969W1 377 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 NABP2Q9BQ15 211 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 CLEC7AQ9BXN2 247 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 MRPL20Q9BYC9 149 aaKnown RBP13.19□□□□□ -0.3
CBX4-204ENST00000495122 PATZ1Q9HBE1 687 aaKnown RBP13.19□□□□□ -0.3
CBX4-204ENST00000495122 KPTNQ9Y664 436 aa13.19□□□□□ -0.3
CBX4-204ENST00000495122 PPIAL4CA0A0B4J2A2 164 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 M0R1W7 72 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 NDUFS6O75380 124 aaKnown RBP13.18□□□□□ -0.3
CBX4-204ENST00000495122 KBTBD11O94819 623 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 F12P00748 615 aaPredicted RBP13.18□□□□□ -0.3
CBX4-204ENST00000495122 APOC3P02656 99 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 PPIAL4GP0DN37 164 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 MDKP21741 143 aaPredicted RBP13.18□□□□□ -0.3
CBX4-204ENST00000495122 LGALS7P47929 136 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 RUNX1Q01196 453 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 GUK1Q16774 197 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 KIR3DL3Q8N743 410 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 FLYWCH2Q96CP2 140 aaKnown RBP13.18□□□□□ -0.3
CBX4-204ENST00000495122 NARFLQ9H6Q4 476 aa13.18□□□□□ -0.3
CBX4-204ENST00000495122 UNKLQ9H9P5 680 aaKnown RBP13.18□□□□□ -0.3
CBX4-204ENST00000495122 UBE2L5PA0A1B0GUS4 154 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 F8W036 122 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 H7C2Y5 167 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 SNAPINO95295 136 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 IFNA10P01566 189 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 IGLV1-47P01700 117 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 TAGLN2P37802 199 aaKnown RBP13.17□□□□□ -0.3
CBX4-204ENST00000495122 HLA-DRB5Q30154 266 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 C1orf122Q6ZSJ8 110 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 ZNF709Q8N972 641 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 TMEM167AQ8TBQ9 72 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 OR51B2Q9Y5P1 312 aa13.17□□□□□ -0.3
CBX4-204ENST00000495122 IGHV2-26A0A0B4J1V2 119 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 LYNX1G3V0Z9 82 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 IGHV4-31P0DP07 118 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 LYNX1P0DP58 116 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 PDLIM4P50479 330 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 VMA21Q3ZAQ7 101 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 MRPL41Q8IXM3 137 aaKnown RBP13.16□□□□□ -0.3
CBX4-204ENST00000495122 HARBI1Q96MB7 349 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 RNF5Q99942 180 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 PLEKHA3Q9HB20 300 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 WDR83OSQ9Y284 106 aa13.16□□□□□ -0.3
CBX4-204ENST00000495122 A0A1W2PN81 502 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 FAM157AC9JC47 383 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 NDUFS8O00217 210 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 SAA1P0DJI8 122 aaPredicted RBP13.15□□□□□ -0.3
CBX4-204ENST00000495122 FGF7P21781 194 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 NPY1RP25929 384 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 CD1BP29016 333 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 CHRNA7P36544 502 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 FHITP49789 147 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 SPSB3Q6PJ21 355 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 VKORC1L1Q8N0U8 176 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 SLC24A4Q8NFF2 622 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 TMEM160Q9NX00 188 aa13.15□□□□□ -0.3
CBX4-204ENST00000495122 TRAV3A0A0B4J244 114 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 PRSS46E5RG02 174 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 IFNA1P01562 189 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 IGKV1-16P04430 117 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 GPR6P46095 362 aaPredicted RBP13.14□□□□□ -0.31
CBX4-204ENST00000495122 DEFA5Q01523 94 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 AVPI1Q5T686 147 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 OR10G4Q8NGN3 311 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 OR1L8Q8NGR8 309 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 SUN5Q8TC36 379 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 PIMREGQ9BSJ6 248 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 SSBP3Q9BWW4 388 aaPredicted RBP13.14□□□□□ -0.31
CBX4-204ENST00000495122 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 NKX6-2Q9C056 277 aaPredicted RBP13.14□□□□□ -0.31
CBX4-204ENST00000495122 EIF5A2Q9GZV4 153 aaKnown RBP13.14□□□□□ -0.31
CBX4-204ENST00000495122 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
CBX4-204ENST00000495122 SLC35B3Q9H1N7 401 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 RPRMQ9NS64 109 aa13.14□□□□□ -0.31
CBX4-204ENST00000495122 RBFOX3A6NFN3 312 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms