RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 COLCA1Q6ZS62 124 aa8.38□□□□□ -1.07
LINC00488-201ENST00000494582 MIR17HGQ75NE6 70 aa8.38□□□□□ -1.07
LINC00488-201ENST00000494582 SPACA9Q96E40 222 aaPredicted RBP8.38□□□□□ -1.07
LINC00488-201ENST00000494582 PMCHL2Q9BQD1 86 aa8.38□□□□□ -1.07
LINC00488-201ENST00000494582 PHF7Q9BWX1 381 aaPredicted RBP8.38□□□□□ -1.07
LINC00488-201ENST00000494582 TRAPPC2LQ9UL33 140 aa8.38□□□□□ -1.07
LINC00488-201ENST00000494582 CACNA1DQ01668 2161 aa8.38□□□□□ -1.07
LINC00488-201ENST00000494582 BRWD1Q9NSI6 2320 aa8.38□□□□□ -1.07
LINC00488-201ENST00000494582 TET2Q6N021 2002 aaPredicted RBP8.37□□□□□ -1.07
LINC00488-201ENST00000494582 FREM1Q5H8C1 2179 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 LINC00473A8K010 186 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 SYS1-DBNDD2H3BUS1 97 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 ISLRO14498 428 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 CRXO43186 299 aaPredicted RBP8.37□□□□□ -1.07
LINC00488-201ENST00000494582 AGFG2O95081 481 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 NGFP01138 241 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 CCL7P80098 99 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 ZNF497Q6ZNH5 498 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 NEGR1Q7Z3B1 354 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 TSTD1Q8NFU3 115 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 RNF208Q9H0X6 261 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 GGTLC3B5MD39 225 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 C21orf140B9A014 251 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 ACTL6BO94805 426 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 UQCRFS1P47985 274 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 MFAP2P55001 183 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 SAMD13Q5VXD3 122 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 H2BFWTQ7Z2G1 175 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 DEFB119Q8N690 84 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 CPT1CQ8TCG5 803 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 ZNF503Q96F45 646 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 IGF2BP2-AS1Q96M15 143 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 LINC00479Q96M42 142 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 PRRG4Q9BZD6 226 aa8.37□□□□□ -1.07
LINC00488-201ENST00000494582 ZNF331Q9NQX6 463 aaPredicted RBP8.37□□□□□ -1.07
LINC00488-201ENST00000494582 TNRC6AQ8NDV7 1962 aaKnown RBP8.36□□□□□ -1.07
LINC00488-201ENST00000494582 PRUNE2Q8WUY3 3088 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 PPIAL4EA0A075B759 164 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 PPIAL4CA0A0B4J2A2 164 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 ZNF503-AS2A6NEH8 195 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 C9orf172C9J069 976 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 PPIAL4FP0DN26 164 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 AREGP15514 252 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 HOXA4Q00056 320 aaPredicted RBP8.36□□□□□ -1.07
LINC00488-201ENST00000494582 COX19Q49B96 90 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 Q6ZR03 302 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 ABHD12Q8N2K0 398 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 ZNF645Q8N7E2 425 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 PRDM14Q9GZV8 571 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 PROK2Q9HC23 129 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 FGF21Q9NSA1 209 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 LSM4Q9Y4Z0 139 aaKnown RBP8.36□□□□□ -1.07
LINC00488-201ENST00000494582 IGHV1-24A0A0C4DH33 117 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 NDUFS8O00217 210 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 P04436 131 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 RNFT1Q5M7Z0 435 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 C9orf135Q5VTT2 229 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 NUP35Q8NFH5 326 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 OR4A5Q8NH83 315 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 POM121L2Q96KW2 1035 aa8.36□□□□□ -1.07
LINC00488-201ENST00000494582 CDX2Q99626 313 aaPredicted RBP8.36□□□□□ -1.07
LINC00488-201ENST00000494582 IGHV3-64DA0A0J9YX35 117 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 ZNF716A6NP11 495 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 OR2H2O95918 312 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 CCL3P10147 92 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 GDF1P27539 372 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 GPR183P32249 361 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 HIST1H1AQ02539 215 aaPredicted RBP8.35□□□□□ -1.07
LINC00488-201ENST00000494582 PSG5Q15238 335 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 TIGITQ495A1 244 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 C17orf82Q86X59 251 aaPredicted RBP8.35□□□□□ -1.07
LINC00488-201ENST00000494582 WIPF2Q8TF74 440 aaPredicted RBP8.35□□□□□ -1.07
LINC00488-201ENST00000494582 MBD6Q96DN6 1003 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 SAP30LQ9HAJ7 183 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 ZNF355PQ9NSJ1 428 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 PILRBQ9UKJ0 227 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 TNRC6BQ9UPQ9 1833 aaKnown RBP8.35□□□□□ -1.07
LINC00488-201ENST00000494582 ZFAND5O76080 213 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 CEBPDP49716 269 aaPredicted RBP8.35□□□□□ -1.07
LINC00488-201ENST00000494582 CAMPP49913 170 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 FOXA3P55318 350 aaPredicted RBP8.35□□□□□ -1.07
LINC00488-201ENST00000494582 AAED1Q7RTV5 226 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 Q8TCH9 128 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 MBNL3Q9NUK0 354 aaKnown RBP8.35□□□□□ -1.07
LINC00488-201ENST00000494582 C1RLQ9NZP8 487 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 HCFC1P51610 2035 aa8.35□□□□□ -1.07
LINC00488-201ENST00000494582 SDK1Q7Z5N4 2213 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 IGHV1OR21-1A0A087WYE8 117 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 A0A096LPE4 126 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 TRAV3A0A0B4J244 114 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 A0A1W2PPZ6 126 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 C5orf49A4QMS7 147 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 H0Y8G0 127 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 H3BUT2 72 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 SMPD2O60906 423 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 MPDU1O75352 247 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 TNFSF15O95150 251 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 HLA-DRB1P01911 266 aa8.34□□□□□ -1.07
LINC00488-201ENST00000494582 FOXG1P55316 489 aaPredicted RBP8.34□□□□□ -1.07
LINC00488-201ENST00000494582 MRPL21Q7Z2W9 205 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms