RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 AQP10Q96PS8 301 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 P2RX4Q99571 388 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 SPIN2AQ99865 258 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 SPIN2BQ9BPZ2 258 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 RNF126Q9BV68 326 aa10.33□□□□□ -0.76
ERCC3-209ENST00000494464 NOTCH3Q9UM47 2321 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 H0YIZ8 118 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 PROP1O75360 226 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 RPLP1P05386 114 aaKnown RBP10.32□□□□□ -0.76
ERCC3-209ENST00000494464 PSMB8P28062 276 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 MYCNOSP40205 109 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 RAB32Q13637 225 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 EXOSC2Q13868 293 aaKnown RBP10.32□□□□□ -0.76
ERCC3-209ENST00000494464 TMEM268Q5VZI3 342 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 MYOZ3Q8TDC0 251 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 DCUN1D4Q92564 292 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 RBPMSQ93062 196 aaKnown RBP10.32□□□□□ -0.76
ERCC3-209ENST00000494464 RNF5Q99942 180 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 GPR61Q9BZJ8 451 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 UBQLN2Q9UHD9 624 aa10.32□□□□□ -0.76
ERCC3-209ENST00000494464 KANTRA0A1W2PQU2 76 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 H7C2Y5 167 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 RRHO14718 337 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 ATP6V0E1O15342 81 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 DEDDO75618 318 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 SPDEFO95238 335 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 PPIFP30405 207 aaKnown RBP10.31□□□□□ -0.76
ERCC3-209ENST00000494464 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
ERCC3-209ENST00000494464 CRIP2P52943 208 aaPredicted RBP10.31□□□□□ -0.76
ERCC3-209ENST00000494464 SMCO1Q147U7 214 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 PDPNQ86YL7 162 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 SELENOHQ8IZQ5 122 aaKnown RBP10.31□□□□□ -0.76
ERCC3-209ENST00000494464 PARP11Q9NR21 331 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 FAM212BQ9NTI7 297 aaPredicted RBP10.31□□□□□ -0.76
ERCC3-209ENST00000494464 OR5AC2Q9NZP5 309 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 GSKIPQ9P0R6 139 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 GAB2Q9UQC2 676 aa10.31□□□□□ -0.76
ERCC3-209ENST00000494464 RBM7Q9Y580 266 aaKnown RBP10.31□□□□□ -0.76
ERCC3-209ENST00000494464 TNFSF12O43508 249 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 CFDP00746 253 aaPredicted RBP10.3□□□□□ -0.76
ERCC3-209ENST00000494464 APOA2P02652 100 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 RLN2P04090 185 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 OR8U9P0C7N5 309 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 SLC25A6P12236 298 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 NUP62P37198 522 aaPredicted RBP10.3□□□□□ -0.76
ERCC3-209ENST00000494464 HTR2BP41595 481 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 S100A10P60903 97 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 NDPQ00604 133 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 EIF4EBP1Q13541 118 aaPredicted RBP10.3□□□□□ -0.76
ERCC3-209ENST00000494464 NMSQ5H8A3 153 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 LCNL1Q6ZST4 164 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 TCTEX1D1Q8N7M0 179 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 ZNF383Q8NA42 475 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 OR4D5Q8NGN0 318 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 OR8U1Q8NH10 309 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 C4orf3Q8WVX3 66 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 ARPC5LQ9BPX5 153 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
ERCC3-209ENST00000494464 OR2D2Q9H210 308 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 FBXL15Q9H469 300 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 AURKAIP1Q9NWT8 199 aaPredicted RBP10.3□□□□□ -0.76
ERCC3-209ENST00000494464 RNF150Q9ULK6 438 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 TGP01266 2768 aa10.3□□□□□ -0.76
ERCC3-209ENST00000494464 TRAV41A0A0B4J266 112 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 CCL24O00175 119 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 IGLV1-40P01703 118 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 PRB2P02812 416 aaPredicted RBP10.29□□□□□ -0.76
ERCC3-209ENST00000494464 SERPINE2P07093 398 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 AP2S1P53680 142 aaPredicted RBP10.29□□□□□ -0.76
ERCC3-209ENST00000494464 EGFEM1PQ0D2K5 195 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 C19orf54Q5BKX5 351 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 CLLU1Q5K131 121 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 OR1S1Q8NH92 325 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 STOML3Q8TAV4 291 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 LSM10Q969L4 123 aaKnown RBP10.29□□□□□ -0.76
ERCC3-209ENST00000494464 PHYHIPLQ96FC7 376 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 RAX2Q96IS3 184 aa10.29□□□□□ -0.76
ERCC3-209ENST00000494464 TSNAXQ99598 290 aaKnown RBP10.29□□□□□ -0.76
ERCC3-209ENST00000494464 RPS10-NUDT3A0A1W2PQS6 291 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 E5RGE8 158 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 G3V318 75 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 K7EPK0 472 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 M0R1X1 148 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 MBPP02686 304 aaPredicted RBP10.28□□□□□ -0.76
ERCC3-209ENST00000494464 IGKV1-16P04430 117 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 CATR1Q13166 79 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 PLGLAQ15195 96 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 THOC7Q6I9Y2 204 aaKnown RBP10.28□□□□□ -0.76
ERCC3-209ENST00000494464 ZNF66Q6ZN08 573 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 OR51H1Q8NH63 302 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 SCARB1Q8WTV0 552 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 ST8SIA2Q92186 375 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 RRNAD1Q96FB5 475 aaKnown RBP10.28□□□□□ -0.76
ERCC3-209ENST00000494464 UBE2E2Q96LR5 201 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 PLEKHA2Q9HB19 425 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 SDHAF2Q9NX18 166 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 NSG2Q9Y328 171 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 FBXO7Q9Y3I1 522 aa10.28□□□□□ -0.76
ERCC3-209ENST00000494464 WSB1Q9Y6I7 421 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms