RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LOXL1Q08397 574 aaPredicted RBP5.43□□□□□ -1.54
MSH5-217ENST00000494458 SLC38A11Q08AI6 406 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 TMEM267Q0VDI3 215 aaPredicted RBP5.43□□□□□ -1.54
MSH5-217ENST00000494458 KLRD1Q13241 179 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 CLINT1Q14677 625 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 DEFB113Q30KQ7 82 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 VMA21Q3ZAQ7 101 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 LHFPL4Q7Z7J7 247 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 MMD2Q8IY49 270 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 TMEM217Q8N7C4 229 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 OR10P1Q8NGE3 313 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 CACNG8Q8WXS5 425 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 NRGNQ92686 78 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 TAF15Q92804 592 aaKnown RBP eCLIP5.43□□□□□ -1.54
MSH5-217ENST00000494458 RBMXL1Q96E39 390 aaKnown RBP5.43□□□□□ -1.54
MSH5-217ENST00000494458 EAF1Q96JC9 268 aaPredicted RBP5.43□□□□□ -1.54
MSH5-217ENST00000494458 CXorf58Q96LI9 332 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 TMEM147Q9BVK8 224 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 NARFLQ9H6Q4 476 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 ZC4H2Q9NQZ6 224 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 WDR83OSQ9Y284 106 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 PTPN13Q12923 2485 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 VPS13CQ709C8 3753 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 TET2Q6N021 2002 aaPredicted RBP5.43□□□□□ -1.54
MSH5-217ENST00000494458 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 TENM4Q6N022 2769 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 CRYBG3Q68DQ2 2970 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 MED13LQ71F56 2210 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 TRAV20A0A0B4J274 112 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 A0A1W2PN81 502 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 IGLC7A0M8Q6 106 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 A1L4Q6 167 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 ANKRD34BA5PLL1 514 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 B4DSR2 109 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 MPDU1O75352 247 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 FBXO24O75426 580 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 MOSP00540 346 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 CA2P00918 260 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 CRYGCP07315 174 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 MSMBP08118 114 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 MYOD1P15172 320 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 CHRNA7P36544 502 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 GPX4P36969 197 aaPredicted RBP5.42□□□□□ -1.54
MSH5-217ENST00000494458 COMPP49747 757 aaPredicted RBP5.42□□□□□ -1.54
MSH5-217ENST00000494458 PRB3Q04118 309 aaPredicted RBP5.42□□□□□ -1.54
MSH5-217ENST00000494458 WT1-ASQ06250 92 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 PJVKQ0ZLH3 352 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 AANATQ16613 207 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 CLEC12BQ2HXU8 276 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 TUSC1Q2TAM9 212 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 TMEM249Q2WGJ8 235 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 UQCC3Q6UW78 93 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 IL34Q6ZMJ4 242 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 MOB3BQ86TA1 216 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 PPP1R27Q86WC6 154 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 COMMD1Q8N668 190 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 SLC24A4Q8NFF2 622 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 PCNPQ8WW12 178 aaKnown RBP5.42□□□□□ -1.54
MSH5-217ENST00000494458 C17orf50Q8WW18 174 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 MBD3L1Q8WWY6 194 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 MARC2Q969Z3 335 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 SH3BGRL3Q9H299 93 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 HEYLQ9NQ87 328 aaPredicted RBP5.42□□□□□ -1.54
MSH5-217ENST00000494458 UQCC1Q9NVA1 299 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 ABCA2Q9BZC7 2435 aa5.42□□□□□ -1.54
MSH5-217ENST00000494458 IGHV3-72A0A0B4J1Y9 119 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 IGHV1-69DA0A0B4J2H0 117 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 ZNF705EA8MWA4 302 aaPredicted RBP5.41□□□□□ -1.54
MSH5-217ENST00000494458 TEX22C9J3V5 150 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 FCN1O00602 326 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 NPFFO15130 113 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 SLC25A17O43808 307 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 NDUFS6O75380 124 aaKnown RBP5.41□□□□□ -1.54
MSH5-217ENST00000494458 RBMXL2O75526 392 aaKnown RBP5.41□□□□□ -1.54
MSH5-217ENST00000494458 FSHBP01225 129 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 IFNA5P01569 189 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 IGHV1-69P01742 117 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 CD5P06127 495 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 SNRNP70P08621 437 aaKnown RBP5.41□□□□□ -1.54
MSH5-217ENST00000494458 NPY1RP25929 384 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 CNTFRP26992 372 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 COL8A1P27658 744 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 F2RL1P55085 397 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 BPIFB3P59826 476 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 RAB11AP62491 216 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 FBLN7Q53RD9 439 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 ARSJQ5FYB0 599 aaPredicted RBP5.41□□□□□ -1.54
MSH5-217ENST00000494458 PXDC1Q5TGL8 231 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 SPSB3Q6PJ21 355 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 ZNF562Q6V9R5 426 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 ETV3LQ6ZN32 361 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 COMMD7Q86VX2 200 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 HSD17B11Q8NBQ5 300 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 OR2T10Q8NGZ9 312 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 PIFOQ8TCI5 191 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 RNASEH2CQ8TDP1 164 aaKnown RBP5.41□□□□□ -1.54
MSH5-217ENST00000494458 PERPQ96FX8 193 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 COMMD5Q9GZQ3 224 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 PLEKHA3Q9HB20 300 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 NPVFQ9HCQ7 196 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms