RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 AMY1AP04745 511 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 IAPPP10997 89 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 PVALBP20472 110 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-231ENST00000494043 VDAC2P45880 294 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-231ENST00000494043 VAMP2P63027 116 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 CX3CL1P78423 397 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 NDPQ00604 133 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 ZNF562Q6V9R5 426 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 OR11H4Q8NGC9 324 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 SRSF12Q8WXF0 261 aaKnown RBP9.04□□□□□ -0.96
MCF2L-231ENST00000494043 DCUN1D4Q92564 292 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 PPP1R14BQ96C90 147 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 CIB3Q96Q77 187 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-231ENST00000494043 HINT2Q9BX68 163 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 PLEKHA3Q9HB20 300 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 ENY2Q9NPA8 101 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 TNCP24821 2201 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 A0A1W2PN81 502 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 DNAJC9-AS1A6NH13 148 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 SH2D7A6NKC9 451 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-231ENST00000494043 TEX22C9J3V5 150 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 E5RGE8 158 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 E7EUB6 86 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 GPR137BO60478 399 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 LY86O95711 162 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 CHRNA7P36544 502 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 PAX9P55771 341 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 TAS2R30P59541 319 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 FXYD3Q14802 87 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 NOXA1Q86UR1 476 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 GRPEL2Q8TAA5 225 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 SMIM8Q96KF7 97 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 HYLS1Q96M11 299 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 HSPB9Q9BQS6 159 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 WSB1Q9Y6I7 421 aa9.03□□□□□ -0.96
MCF2L-231ENST00000494043 IGLC7A0M8Q6 106 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 INS-IGF2F8WCM5 200 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 TSC22D2O75157 780 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 HNRNPCP07910 306 aaKnown RBP eCLIP9.02□□□□□ -0.97
MCF2L-231ENST00000494043 FAM157CP0CG43 387 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 P2RY1P47900 373 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 RPL23AP62750 156 aaKnown RBP9.02□□□□□ -0.97
MCF2L-231ENST00000494043 TMEM65Q6PI78 240 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 ZNF546Q86UE3 836 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 MRPL41Q8IXM3 137 aaKnown RBP9.02□□□□□ -0.97
MCF2L-231ENST00000494043 OR10W1Q8NGF6 305 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 ZNF418Q8TF45 676 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-231ENST00000494043 DUX5Q96PT3 197 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 SRSF8Q9BRL6 282 aaKnown RBP9.02□□□□□ -0.97
MCF2L-231ENST00000494043 HIPK2Q9H2X6 1198 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 ESM1Q9NQ30 184 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 HEYLQ9NQ87 328 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-231ENST00000494043 LYRM2Q9NU23 88 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-231ENST00000494043 PSENENQ9NZ42 101 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 TNFSF18Q9UNG2 199 aa9.02□□□□□ -0.97
MCF2L-231ENST00000494043 TET2Q6N021 2002 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-231ENST00000494043 MSGN1A6NI15 193 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 HMSDA8MTL9 139 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 H3BP45 60 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 CLDN34H7C241 214 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 ARPC5O15511 151 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 CRLF1O75462 422 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 EGR2P11161 476 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-231ENST00000494043 CAV2P51636 162 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 WT1-ASQ06250 92 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-231ENST00000494043 HSD17B13Q7Z5P4 300 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-231ENST00000494043 OR2C3Q8N628 320 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 ABHD5Q8WTS1 349 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 OR4C12Q96R67 309 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 FAM103A1Q9BTL3 118 aaKnown RBP9.01□□□□□ -0.97
MCF2L-231ENST00000494043 PARP11Q9NR21 331 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 FBXO7Q9Y3I1 522 aa9.01□□□□□ -0.97
MCF2L-231ENST00000494043 FN1P02751 2386 aaKnown RBP9□□□□□ -0.97
MCF2L-231ENST00000494043 IGSF23A1L1A6 192 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 RNF222A6NCQ9 220 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 FAM24AA6NFZ4 105 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 ATP6V0E1O15342 81 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 KCNAB3O43448 404 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 IGHG2P01859 326 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 APELAP0DMC3 54 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 OR13C7P0DN81 318 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 AREGP15514 252 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 RPL12P30050 165 aaKnown RBP9□□□□□ -0.97
MCF2L-231ENST00000494043 NUP62P37198 522 aaPredicted RBP9□□□□□ -0.97
MCF2L-231ENST00000494043 HTR2BP41595 481 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 NKX2-5P52952 324 aaPredicted RBP9□□□□□ -0.97
MCF2L-231ENST00000494043 HILS1P60008 231 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 BLCAPP62952 87 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 RPP30P78346 268 aaKnown RBP9□□□□□ -0.97
MCF2L-231ENST00000494043 ERHP84090 104 aaKnown RBP9□□□□□ -0.97
MCF2L-231ENST00000494043 BSXQ3C1V8 233 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 C9orf152Q5JTZ5 239 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 SPANXN5Q5MJ07 72 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 INO80EQ8NBZ0 244 aaPredicted RBP9□□□□□ -0.97
MCF2L-231ENST00000494043 SLC24A4Q8NFF2 622 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 AQP10Q96PS8 301 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 NPFFR1Q9GZQ6 430 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 STRAPQ9Y3F4 350 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms