RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TMED3Q9Y3Q3 217 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 C13orf42A0A1B0GVH6 325 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 SRRM4A7MD48 611 aaKnown RBP9.6□□□□□ -0.87
UPF3A-210ENST00000493727 RRHO14718 337 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 ADAP1O75689 374 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 SNAPC5O75971 98 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 OR2A4O95047 310 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 IGKV1-5P01602 117 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 VDAC1P21796 283 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 CNTFRP26992 372 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 UBE2KP61086 200 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 EBI3Q14213 229 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 PSG5Q15238 335 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 GGNBP1Q5YKI7 109 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 FAM219AQ8IW50 185 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 SYT8Q8NBV8 401 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 OR4A16Q8NH70 328 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 LSM10Q969L4 123 aaKnown RBP9.6□□□□□ -0.87
UPF3A-210ENST00000493727 SEC22AQ96IW7 307 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 RITA1Q96K30 269 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 OR2A7Q96R45 310 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 PDCD10Q9BUL8 212 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 FBXL15Q9H469 300 aa9.6□□□□□ -0.87
UPF3A-210ENST00000493727 A6NDX4 124 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 OR2F2O95006 317 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 IGLV2-23P01705 113 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 F2RL1P55085 397 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 RRAS2P62070 204 aaPredicted RBP9.59□□□□□ -0.87
UPF3A-210ENST00000493727 FCN2Q15485 313 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 POU2AF1Q16633 256 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 GSG1LQ6UXU4 331 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 Q8N6K4 173 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 PIFOQ8TCI5 191 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 RBM14Q96PK6 669 aaKnown RBP9.59□□□□□ -0.87
UPF3A-210ENST00000493727 CLCC1Q96S66 551 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 RASL11BQ9BPW5 248 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 BET1LQ9NYM9 111 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 CACNG5Q9UF02 275 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 SIGLEC9Q9Y336 463 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 COL7A1Q02388 2944 aa9.59□□□□□ -0.87
UPF3A-210ENST00000493727 A0A0G2JRQ6 117 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 A0A1B0GVG6 124 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 M0QZK8 103 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 ACTL6BO94805 426 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 KBTBD11O94819 623 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 NDUFA3O95167 84 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 OR9G9P0C7N8 305 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 SULT1A3P0DMM9 295 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 SULT1A4P0DMN0 295 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 OR2B8PP59922 312 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 GNB1P62873 340 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 SMCO1Q147U7 214 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 IZUMO4Q1ZYL8 232 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 C5orf64Q2M2E5 130 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 IAH1Q2TAA2 248 aaPredicted RBP9.58□□□□□ -0.88
UPF3A-210ENST00000493727 PUSL1Q8N0Z8 303 aaKnown RBP9.58□□□□□ -0.88
UPF3A-210ENST00000493727 Q8N2B8 174 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 TEX45Q8NA69 505 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 NPBQ8NG41 125 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 OR5M8Q8NGP6 311 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 OR4A5Q8NH83 315 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 OR1S1Q8NH92 325 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 GPR146Q96CH1 333 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 PRSS22Q9GZN4 317 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 GSKIPQ9P0R6 139 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 NSG2Q9Y328 171 aa9.58□□□□□ -0.88
UPF3A-210ENST00000493727 A0A1B0GU03 582 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 UPK2O00526 184 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 CHST1O43916 411 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 SIX6O95475 246 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 SCGB1D2O95969 90 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 PRB2P02812 416 aaPredicted RBP9.57□□□□□ -0.88
UPF3A-210ENST00000493727 RPL8P62917 257 aaKnown RBP9.57□□□□□ -0.88
UPF3A-210ENST00000493727 TNXAQ16473 311 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 NMSQ5H8A3 153 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 C9orf152Q5JTZ5 239 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 PPP1R27Q86WC6 154 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 NDUFA11Q86Y39 141 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 MMD2Q8IY49 270 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 ABHD5Q8WTS1 349 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 ZNF702PQ9H963 129 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 PRNDQ9UKY0 176 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 TENM3Q9P273 2699 aa9.57□□□□□ -0.88
UPF3A-210ENST00000493727 TRAV3A0A0B4J244 114 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 HMX3A6NHT5 357 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 C15orf61A6NNL5 157 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 FGF16O43320 207 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 NXPH3O95157 252 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 CNIH1O95406 144 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 CA2P00918 260 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 P0C879 139 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 HLA-GP17693 338 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 PRSS8Q16651 343 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 CADM3Q8N126 398 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 C5orf56Q8N8D9 126 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 C11orf44Q8N8P7 122 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms