RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SRSF8Q9BRL6 282 aaKnown RBP5.24□□□□□ -1.57
VPS52-219ENST00000493379 C5orf66Q9H5L9 145 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 HRASLSQ9HDD0 168 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 PTTG2Q9NZH5 202 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 SCP2D1Q9UJQ7 156 aa5.24□□□□□ -1.57
VPS52-219ENST00000493379 TSSC4Q9Y5U2 329 aaPredicted RBP5.24□□□□□ -1.57
VPS52-219ENST00000493379 TRBV9A0A0B4J1U6 114 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 TRAV41A0A0B4J266 112 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 A0A1B0GW64 132 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 NAP1L6A6NFF2 107 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 INS-IGF2F8WCM5 200 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 H0Y980 276 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 UPK2O00526 184 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 SOX15O60248 233 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 CREBL2O60519 120 aaPredicted RBP5.23□□□□□ -1.57
VPS52-219ENST00000493379 ACTL6BO94805 426 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 KBTBD11O94819 623 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 CA2P00918 260 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 OPN1MWP04001 364 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 CRYGCP07315 174 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 OPN1MW2P0DN77 364 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 OPN1MW3P0DN78 364 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 UCP1P25874 307 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 S100GP29377 79 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 CD40LGP29965 261 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 PPP5CP53041 499 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 PIGPP57054 158 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 CD300EQ496F6 205 aaPredicted RBP5.23□□□□□ -1.57
VPS52-219ENST00000493379 PYDC2Q56P42 97 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 ASPHD1Q5U4P2 390 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 C10orf99Q6UWK7 81 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 TBC1D26Q86UD7 250 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 TTC9CQ8N5M4 171 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 POC5Q8NA72 575 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 OR4X2Q8NGF9 303 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 OR5M8Q8NGP6 311 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 MARCH1Q8TCQ1 289 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 GLYATL2Q8WU03 294 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 S100ZQ8WXG8 99 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 UBE2E2Q96LR5 201 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 SCGB3A2Q96PL1 93 aa5.23□□□□□ -1.57
VPS52-219ENST00000493379 CITED2Q99967 270 aaPredicted RBP5.23□□□□□ -1.57
VPS52-219ENST00000493379 C7orf50Q9BRJ6 194 aaKnown RBP5.23□□□□□ -1.57
VPS52-219ENST00000493379 ZNF430Q9H8G1 570 aaPredicted RBP5.23□□□□□ -1.57
VPS52-219ENST00000493379 C3orf85A0A1B0GTC6 90 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 HMX3A6NHT5 357 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 MSGN1A6NI15 193 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 CRYM-AS1A6NIL9 109 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 CGB1A6NKQ9 187 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 DBX1A6NMT0 343 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 MARCH11A6NNE9 402 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TEX22C9J3V5 150 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 E7EUB6 86 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 F5H697 171 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 G3V318 75 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 I3L521 148 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 M0QZ24 198 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 PLA2G10O15496 165 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TNFSF12O43508 249 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TRIAP1O43715 76 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 SCAF4O95104 1147 aaKnown RBP5.22□□□□□ -1.57
VPS52-219ENST00000493379 RLN1P04808 185 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 BTCP35070 178 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 FAUP35544 74 aaKnown RBP5.22□□□□□ -1.57
VPS52-219ENST00000493379 LPAR6P43657 344 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 RAB9AP51151 201 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 RPL23AP62750 156 aaKnown RBP5.22□□□□□ -1.57
VPS52-219ENST00000493379 RPL8P62917 257 aaKnown RBP5.22□□□□□ -1.57
VPS52-219ENST00000493379 RNASE12Q5GAN4 147 aaKnown RBP5.22□□□□□ -1.57
VPS52-219ENST00000493379 C9orf152Q5JTZ5 239 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 OR4A47Q6IF82 309 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 IDO2Q6ZQW0 420 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 ZNF329Q86UD4 541 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 ZNF429Q86V71 674 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 ZNF491Q8N8L2 437 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 LFNGQ8NES3 379 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 OR51H1Q8NH63 302 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 SRSF12Q8WXF0 261 aaKnown RBP5.22□□□□□ -1.57
VPS52-219ENST00000493379 ARPC1AQ92747 370 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 IL22RA2Q969J5 263 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TMEM230Q96A57 120 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TMEM56Q96MV1 263 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TP53RKQ96S44 253 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 CCDC32Q9BV29 185 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TMEM222Q9H0R3 208 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 ALX4Q9H161 411 aaPredicted RBP5.22□□□□□ -1.57
VPS52-219ENST00000493379 KLK15Q9H2R5 256 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 SLA2Q9H6Q3 261 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TMEM14BQ9NUH8 114 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 LINC00527Q9UJ94 153 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 ZNF257Q9Y2Q1 563 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TMEM56-RWDD3S4R434 201 aa5.22□□□□□ -1.57
VPS52-219ENST00000493379 TEX13DA0A0J9YY54 714 aaPredicted RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 NPIPB5A8MRT5 1133 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 S1PR2O95136 353 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 NDUFB6O95139 128 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 IL7P13232 177 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 CTRB1P17538 263 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 VDAC1P21796 283 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms