RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 RPS19P39019 145 aaKnown RBP9.37□□□□□ -0.91
COL6A1-205ENST00000492851 RFX2P48378 723 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 LAMTOR1Q6IAA8 161 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 SLC25A24Q6NUK1 477 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 SPSB3Q6PJ21 355 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 SLC38A6Q8IZM9 456 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 SAMD12Q8N8I0 201 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 GDPD1Q8N9F7 314 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 ZNF502Q8TBZ5 544 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 LSM10Q969L4 123 aaKnown RBP9.37□□□□□ -0.91
COL6A1-205ENST00000492851 DGCR14Q96DF8 476 aaKnown RBP9.37□□□□□ -0.91
COL6A1-205ENST00000492851 TMEM56Q96MV1 263 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 TSC22D3Q99576 134 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 FAM212BQ9NTI7 297 aaPredicted RBP9.37□□□□□ -0.91
COL6A1-205ENST00000492851 GAR1Q9NY12 217 aaKnown RBP9.37□□□□□ -0.91
COL6A1-205ENST00000492851 PRNDQ9UKY0 176 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 TEX50A0A1B0GTY4 177 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 RBMY1BA6NDE4 496 aaKnown RBP9.36□□□□□ -0.91
COL6A1-205ENST00000492851 MEIS3P1A6NDR6 274 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 RBMY1EA6NEQ0 496 aaKnown RBP9.36□□□□□ -0.91
COL6A1-205ENST00000492851 MFSD2BA6NFX1 497 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 GPR31O00270 319 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 S1PR2O95136 353 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 KRASP01116 189 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 PMP2P02689 132 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 FCER2P06734 321 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 RBMY1DP0C7P1 496 aaKnown RBP9.36□□□□□ -0.91
COL6A1-205ENST00000492851 OR13C7P0DN81 318 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 GPR183P32249 361 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 TAS2R20P59543 309 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 ZNF585BQ52M93 769 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 OR2C3Q8N628 320 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 OR5B3Q8NH48 314 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 BSCL2Q96G97 398 aaPredicted RBP9.36□□□□□ -0.91
COL6A1-205ENST00000492851 ZNF436Q9C0F3 470 aaPredicted RBP9.36□□□□□ -0.91
COL6A1-205ENST00000492851 SCPEP1Q9HB40 452 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 NDUFA4L2Q9NRX3 87 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 MLXQ9UH92 298 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 ANAPC10Q9UM13 185 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 S4R3C0 116 aa9.36□□□□□ -0.91
COL6A1-205ENST00000492851 LOC102724200A0A096LPH7 203 aaPredicted RBP9.35□□□□□ -0.91
COL6A1-205ENST00000492851 TRAV3A0A0B4J244 114 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 TGOLN2O43493 480 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 JTBO76095 146 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 TNFAIP8O95379 198 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 RLN1P04808 185 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 LPAR6P43657 344 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 TSPAN5P62079 268 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 TM4SF20Q53R12 229 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 OR10W1Q8NGF6 305 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 CACNG8Q8WXS5 425 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 SLC25A46Q96AG3 418 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 YIPF6Q96EC8 236 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 SPAG8Q99932 426 aaPredicted RBP9.35□□□□□ -0.91
COL6A1-205ENST00000492851 GGTLC1Q9BX51 225 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 OR51B2Q9Y5P1 312 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 F11RQ9Y624 299 aaKnown RBP9.35□□□□□ -0.91
COL6A1-205ENST00000492851 DNAH7Q8WXX0 4024 aa9.35□□□□□ -0.91
COL6A1-205ENST00000492851 K7EMT4 169 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 NDUFA4O00483 81 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 SCAF4O95104 1147 aaKnown RBP9.34□□□□□ -0.91
COL6A1-205ENST00000492851 APOA1P02647 267 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 WT1-ASQ06250 92 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 BTNL8Q6UX41 500 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 UNQ9165/PRO28630Q6UXU0 137 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 LYSMD2Q8IV50 215 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 FCAMRQ8WWV6 532 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 TMEM190Q8WZ59 177 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 HINT2Q9BX68 163 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 DAZ1Q9NQZ3 744 aaKnown RBP9.34□□□□□ -0.91
COL6A1-205ENST00000492851 C21orf62Q9NYP8 219 aa9.34□□□□□ -0.91
COL6A1-205ENST00000492851 TNCP24821 2201 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 EDN2P20800 178 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 HLA-DMAP28067 261 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 HRH1P35367 487 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 APOC4P55056 127 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 UCP3P55916 312 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 CMC4P56277 68 aaPredicted RBP9.33□□□□□ -0.92
COL6A1-205ENST00000492851 LSM3P62310 102 aaKnown RBP9.33□□□□□ -0.92
COL6A1-205ENST00000492851 GPX8Q8TED1 209 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 SCARB1Q8WTV0 552 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 TXN2Q99757 166 aa9.33□□□□□ -0.92
COL6A1-205ENST00000492851 OR2T8A6NH00 312 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 C15orf62A8K5M9 175 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 UBE2CO00762 179 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 TSPAN4O14817 238 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 RPA2P15927 270 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 RCVRNP35243 200 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 G6PCP35575 357 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 RELQ04864 619 aaPredicted RBP9.32□□□□□ -0.92
COL6A1-205ENST00000492851 Q6ZWC4 215 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 OR1P1Q8NH06 330 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 OR4A16Q8NH70 328 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 FAM110AQ9BQ89 295 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 RETNQ9HD89 108 aa9.32□□□□□ -0.92
COL6A1-205ENST00000492851 TMEM14BQ9NUH8 114 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms