RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 CLDN34H7C241 214 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 DFFBO76075 338 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 BRI3O95415 125 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 CD99P14209 185 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 SRP14P37108 136 aaKnown RBP7.69□□□□□ -1.18
USP54-214ENST00000492357 HOXA1P49639 335 aaPredicted RBP7.69□□□□□ -1.18
USP54-214ENST00000492357 PAX9P55771 341 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 ZNF266Q14584 549 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 IZUMO4Q1ZYL8 232 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 MRGPRG-AS1Q2M3A8 158 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 KLK9Q2XQG4 91 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 C2orf83Q53S99 150 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 Q5BKY6 102 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 PVRIGQ6DKI7 326 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 RBMS3Q6XE24 437 aaKnown RBP7.69□□□□□ -1.18
USP54-214ENST00000492357 TMEM252Q8N6L7 170 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 Q8N9W7 124 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 SRSF12Q8WXF0 261 aaKnown RBP7.69□□□□□ -1.18
USP54-214ENST00000492357 SLC25A33Q9BSK2 321 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 GON7Q9BXV9 100 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 PARD6GQ9BYG4 376 aaPredicted RBP7.69□□□□□ -1.18
USP54-214ENST00000492357 FBXL15Q9H469 300 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 YAE1D1Q9NRH1 226 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 PSENENQ9NZ42 101 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 VPREB3Q9UKI3 123 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 KLK9Q9UKQ9 250 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 HSPB11Q9Y547 144 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 NAV3Q8IVL0 2385 aa7.69□□□□□ -1.18
USP54-214ENST00000492357 MYO9AB2RTY4 2548 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 KANTRA0A1W2PQU2 76 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 NCBP2LA6PVI3 153 aaKnown RBP7.68□□□□□ -1.18
USP54-214ENST00000492357 H3BUX3 64 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 BCL2L11O43521 198 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 JTBO76095 146 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 HKR1P10072 659 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 SNCAP37840 140 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 CAV2P51636 162 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 EWSR1Q01844 656 aaKnown RBP eCLIP7.68□□□□□ -1.18
USP54-214ENST00000492357 TMEM267Q0VDI3 215 aaPredicted RBP7.68□□□□□ -1.18
USP54-214ENST00000492357 TNXAQ16473 311 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 DEFB112Q30KQ8 113 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 LGALSLQ3ZCW2 172 aaPredicted RBP7.68□□□□□ -1.18
USP54-214ENST00000492357 LAMTOR1Q6IAA8 161 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 SLC51BQ86UW2 128 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 C5orf56Q8N8D9 126 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 SLC24A4Q8NFF2 622 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 RNASEH2CQ8TDP1 164 aaKnown RBP7.68□□□□□ -1.18
USP54-214ENST00000492357 CACNG8Q8WXS5 425 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 RITA1Q96K30 269 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 JMJD8Q96S16 334 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 ARPC5LQ9BPX5 153 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 MAGT1Q9H0U3 335 aa7.68□□□□□ -1.18
USP54-214ENST00000492357 IGHV3OR16-10A0A075B7F0 116 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 BORCS7-ASMTA0A0B4J1R7 106 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 IGLC7A0M8Q6 106 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 NPIPB5A8MRT5 1133 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 SMLR1H3BR10 107 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 TMEM50AO95807 157 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 CA2P00918 260 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 IGHG2P01859 326 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 IGF1P05019 195 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 CRYGCP07315 174 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 NPY1RP25929 384 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 GPX4P36969 197 aaPredicted RBP7.67□□□□□ -1.18
USP54-214ENST00000492357 CX3CL1P78423 397 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 FXYD3Q14802 87 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 AKIRIN2Q53H80 203 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 ETFRF1Q6IPR1 90 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 EIF5AL1Q6IS14 154 aaKnown RBP7.67□□□□□ -1.18
USP54-214ENST00000492357 TMUB2Q71RG4 321 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 UBAC2Q8NBM4 344 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 OR10P1Q8NGE3 313 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 OR1P1Q8NH06 330 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 SGMS2Q8NHU3 365 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 STOML3Q8TAV4 291 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 ARPC1AQ92747 370 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 PHYHIPLQ96FC7 376 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 ATP6V0BQ99437 205 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 ARL6Q9H0F7 186 aa7.67□□□□□ -1.18
USP54-214ENST00000492357 BAHCC1Q9P281 2608 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 TMEM89A2RUT3 159 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 H3BUA1 57 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 MPDU1O75352 247 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 CNIH1O95406 144 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 IFNA10P01566 189 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 OR8U8P0C7N1 319 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 HIST1H1BP16401 226 aaKnown RBP7.66□□□□□ -1.18
USP54-214ENST00000492357 CXCL2P19875 107 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 CNTFRP26992 372 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 UBA52P62987 128 aaKnown RBP7.66□□□□□ -1.18
USP54-214ENST00000492357 DLK1P80370 383 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 SSBP2P81877 361 aaPredicted RBP7.66□□□□□ -1.18
USP54-214ENST00000492357 EXOSC2Q13868 293 aaKnown RBP7.66□□□□□ -1.18
USP54-214ENST00000492357 HNF4GQ14541 408 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 OPCMLQ14982 345 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 VWC2Q2TAL6 325 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 TTC9CQ8N5M4 171 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 OR1S2Q8NGQ3 325 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 ZNF418Q8TF45 676 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms