RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 NINQ8N4C6 2090 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 OR11H12B2RN74 326 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 C1QCP02747 245 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 NBEAP1P0C6P0 100 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 GCHFRP30047 84 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 P2RY4P51582 365 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 OR11H1Q8NG94 326 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 OR11H2Q8NH07 326 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 CRIM1Q9NZV1 1036 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 J3QW42 95 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 DUSP14O95147 198 aaKnown RBP11.08□□□□□ -0.64
COL6A3-212ENST00000491769 TDGF1P3P51864 188 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 C4orf51C9J302 202 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 PLAC1Q9HBJ0 212 aa11.08□□□□□ -0.64
COL6A3-212ENST00000491769 E9PLN8 166 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 FOLR2P14207 255 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 LRTM2Q8N967 370 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 VKORC1Q9BQB6 163 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 ATP5LO75964 103 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 ERGP11308 486 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 MEF2CQ06413 473 aaPredicted RBP11.07□□□□□ -0.64
COL6A3-212ENST00000491769 CENPWQ5EE01 88 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 C12orf77C9JDV5 145 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 TCF21O43680 179 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 ZNF79Q15937 498 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 GPR132Q9UNW8 380 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 RAMP1O60894 148 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 IGFBP2P18065 325 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 LIMS1P48059 325 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 RHOGP84095 191 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 LINC00312Q9Y6C7 94 aa11.07□□□□□ -0.64
COL6A3-212ENST00000491769 TRBV5-5A0A0J9YX44 114 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 HBBP68871 147 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 FAM89BQ8N5H3 189 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 GATAD1Q8WUU5 269 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 UNC13CQ8NB66 2214 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 FUT5Q11128 374 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 FBLN7Q53RD9 439 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 ATOH7Q8N100 152 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 SMIM8Q96KF7 97 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 ELF5Q9UKW6 265 aaPredicted RBP11.06□□□□□ -0.64
COL6A3-212ENST00000491769 A0A087WX48 190 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 NDUFA3O95167 84 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 LHX2P50458 406 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 PSG7Q13046 419 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 POC1AQ8NBT0 407 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 RARRES2Q99969 163 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 ADARB2-AS1A8MUL3 147 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 ZNF345Q14585 488 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 TMEM219Q86XT9 240 aa11.06□□□□□ -0.64
COL6A3-212ENST00000491769 PSMG4Q5JS54 123 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 MRPL16Q9NX20 251 aaKnown RBP11.05□□□□□ -0.64
COL6A3-212ENST00000491769 TDRD6O60522 2096 aaKnown RBP11.05□□□□□ -0.64
COL6A3-212ENST00000491769 C10orf126Q8N4M7 172 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 ZNF414Q96IQ9 312 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 KCNS1Q96KK3 526 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 AGAP20933 346 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 PMCHL1Q16048 86 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 ZNF506Q5JVG8 444 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 C1QL2Q7Z5L3 287 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 HIST1H2BAQ96A08 127 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 PRADC1Q9BSG0 188 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 GFI1BQ5VTD9 330 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 SLC25A34Q6PIV7 304 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.05□□□□□ -0.64
COL6A3-212ENST00000491769 OR52E5Q8NH55 327 aa11.05□□□□□ -0.64
COL6A3-212ENST00000491769 TRBV5-3A0A0A0MS03 114 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 TRAV12-3A0A0B4J271 114 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 IGHMP01871 453 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 EGR1P18146 543 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
COL6A3-212ENST00000491769 ASPHD2Q6ICH7 369 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 STPG2Q8N412 459 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 LOC390937A0A1W2PQ73 354 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 ZP1P60852 638 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 CGAP01215 116 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 TRGC2P03986 189 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 C9orf62Q8N4C0 152 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 PKIAP61925 76 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 COTL1Q14019 142 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 FER1L6-AS1Q8NA97 138 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
COL6A3-212ENST00000491769 C17orf98A8MV24 154 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 TMEM95Q3KNT9 176 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 Q71RC1 249 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-212ENST00000491769 VCX2Q9H322 139 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 IGKV1D-42A0A075B6H8 117 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 APCDD1LQ8NCL9 501 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 ST20Q9HBF5 79 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 TGIF2-C20orf24A0A0A6YYL0 155 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 K7ERU9 68 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 TMEM133Q9H2Q1 129 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 ATP5IP56385 69 aaPredicted RBP11.03□□□□□ -0.64
COL6A3-212ENST00000491769 Q9H3A6 140 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 KIAA1551Q9HCM1 1747 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 C1QTNF9BB2RNN3 333 aa11.03□□□□□ -0.64
COL6A3-212ENST00000491769 IFI27P40305 119 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms