RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 CNIH1O95406 144 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 SCGB1D2O95969 90 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 IFNA17P01571 189 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 CRYGBP07316 175 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 P0C879 139 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 CXCL3P19876 107 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 CD33P20138 364 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
CDK9-204ENST00000491521 CD83Q01151 205 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 PJVKQ0ZLH3 352 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 TNXAQ16473 311 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 PRSS8Q16651 343 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 TCTEX1D4Q5JR98 221 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 ZNF329Q86UD4 541 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 Q8N9W7 124 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 ZBTB8BQ8NAP8 495 aaPredicted RBP10.74□□□□□ -0.69
CDK9-204ENST00000491521 OR4X2Q8NGF9 303 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 HINT2Q9BX68 163 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 COMMD5Q9GZQ3 224 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 ZNF430Q9H8G1 570 aaPredicted RBP10.74□□□□□ -0.69
CDK9-204ENST00000491521 FKBP11Q9NYL4 201 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 LINC00527Q9UJ94 153 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 PRNDQ9UKY0 176 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 OR51B2Q9Y5P1 312 aa10.74□□□□□ -0.69
CDK9-204ENST00000491521 FGF16O43320 207 aa10.73□□□□□ -0.69
CDK9-204ENST00000491521 CA2P00918 260 aa10.73□□□□□ -0.69
CDK9-204ENST00000491521 PF4P02776 101 aa10.73□□□□□ -0.69
CDK9-204ENST00000491521 IL6RP08887 468 aaPredicted RBP10.73□□□□□ -0.69
CDK9-204ENST00000491521 SLC25A6P12236 298 aa10.73□□□□□ -0.69
CDK9-204ENST00000491521 MYOD1P15172 320 aa10.73□□□□□ -0.69
CDK9-204ENST00000491521 CYCSP99999 105 aaKnown RBP10.73□□□□□ -0.69
CDK9-204ENST00000491521 FAM71E2Q8N5Q1 922 aa10.73□□□□□ -0.69
CDK9-204ENST00000491521 C5orf56Q8N8D9 126 aa10.73□□□□□ -0.69
CDK9-204ENST00000491521 ABHD5Q8WTS1 349 aa10.73□□□□□ -0.69
CDK9-204ENST00000491521 NOL4LQ96MY1 436 aaPredicted RBP10.73□□□□□ -0.69
CDK9-204ENST00000491521 QTRT1Q9BXR0 403 aaKnown RBP10.73□□□□□ -0.69
CDK9-204ENST00000491521 ZNF436Q9C0F3 470 aaPredicted RBP10.73□□□□□ -0.69
CDK9-204ENST00000491521 TSSC4Q9Y5U2 329 aaPredicted RBP10.73□□□□□ -0.69
CDK9-204ENST00000491521 TEX50A0A1B0GTY4 177 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 PSMB11A5LHX3 300 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 C15orf61A6NNL5 157 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 ST8SIA3O43173 380 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 IGLL1P15814 213 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 MAS1LP35410 378 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 H2BFSP57053 126 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 CXorf66Q5JRM2 361 aaPredicted RBP10.72□□□□□ -0.69
CDK9-204ENST00000491521 FOXRED2Q8IWF2 684 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 FYTTD1Q96QD9 318 aaKnown RBP10.72□□□□□ -0.69
CDK9-204ENST00000491521 COA4Q9NYJ1 87 aa10.72□□□□□ -0.69
CDK9-204ENST00000491521 WRBO00258 174 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 CCNKO75909 580 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 NKX2-1P43699 371 aaPredicted RBP10.71□□□□□ -0.69
CDK9-204ENST00000491521 RPL27AP46776 148 aaKnown RBP10.71□□□□□ -0.69
CDK9-204ENST00000491521 HSPE1P61604 102 aaKnown RBP10.71□□□□□ -0.69
CDK9-204ENST00000491521 CX3CL1P78423 397 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 FXYD3Q14802 87 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 SPINK9Q5DT21 86 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 ZNF562Q6V9R5 426 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 OR1L8Q8NGR8 309 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 CHAC2Q8WUX2 184 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 WDR89Q96FK6 387 aaPredicted RBP10.71□□□□□ -0.69
CDK9-204ENST00000491521 NMES1Q9C002 83 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 MAGT1Q9H0U3 335 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 CACFD1Q9UGQ2 172 aa10.71□□□□□ -0.69
CDK9-204ENST00000491521 FOXA2Q9Y261 457 aaPredicted RBP10.71□□□□□ -0.69
CDK9-204ENST00000491521 CEBPZOSA8MTT3 80 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 PITX3O75364 302 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 FGF2P09038 288 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 TRAPPC2P0DI81 140 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 TRAPPC2BP0DI82 140 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 S100A10P60903 97 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 SPCS3P61009 180 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 MRGPRG-AS1Q2M3A8 158 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 LRRC37A5PQ49AS3 106 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 C10orf55Q5SWW7 151 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
CDK9-204ENST00000491521 ZNF429Q86V71 674 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 OR4D5Q8NGN0 318 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 GRPEL2Q8TAA5 225 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 ENY2Q9NPA8 101 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 PARP11Q9NR21 331 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
CDK9-204ENST00000491521 LSM5Q9Y4Y9 91 aaKnown RBP10.7□□□□□ -0.7
CDK9-204ENST00000491521 MSGN1A6NI15 193 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 LINC01548A6NM66 108 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 NUDT19A8MXV4 375 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 MED6O75586 246 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 MBPP02686 304 aaPredicted RBP10.69□□□□□ -0.7
CDK9-204ENST00000491521 RLN2P04090 185 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 GIPP09681 153 aaPredicted RBP10.69□□□□□ -0.7
CDK9-204ENST00000491521 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
CDK9-204ENST00000491521 RAP2BP61225 183 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 ID3Q02535 119 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 TNFRSF9Q07011 255 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 RAB32Q13637 225 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 SLC35E3Q7Z769 313 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 AKAP14Q86UN6 197 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 OR5B3Q8NH48 314 aa10.69□□□□□ -0.7
CDK9-204ENST00000491521 OR52E5Q8NH55 327 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms