RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ZDHHC16Q969W1 377 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 RPUSD4Q96CM3 377 aaKnown RBP18.59■□□□□ 0.57
USF3-203ENST00000491165 MALRD1Q5VYJ5 2156 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 IGHV4-30-2A0A087WSY4 118 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 TRBV23-1A0A0A0MS06 115 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 BSXQ3C1V8 233 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 ZNF66Q6ZN08 573 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 ZNF709Q8N972 641 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 ZNF383Q8NA42 475 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 OR10A7Q8NGE5 316 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 C10orf105Q8TEF2 133 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 FAM168AQ92567 244 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 TIMD4Q96H15 378 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 NPCDR1Q9BY65 106 aa18.59■□□□□ 0.57
USF3-203ENST00000491165 ABCA2Q9BZC7 2435 aa18.58■□□□□ 0.57
USF3-203ENST00000491165 NDUFS6O75380 124 aaKnown RBP18.58■□□□□ 0.57
USF3-203ENST00000491165 RBMXL2O75526 392 aaKnown RBP18.58■□□□□ 0.57
USF3-203ENST00000491165 PDLIM4P50479 330 aa18.58■□□□□ 0.57
USF3-203ENST00000491165 VWC2Q2TAL6 325 aa18.58■□□□□ 0.57
USF3-203ENST00000491165 BEX4Q9NWD9 120 aaPredicted RBP18.58■□□□□ 0.57
USF3-203ENST00000491165 ZNF729A6NN14 1252 aaPredicted RBP18.58■□□□□ 0.56
USF3-203ENST00000491165 RPL23P62829 140 aaKnown RBP18.58■□□□□ 0.56
USF3-203ENST00000491165 PFDN5Q99471 154 aa18.58■□□□□ 0.56
USF3-203ENST00000491165 PARLQ9H300 379 aa18.58■□□□□ 0.56
USF3-203ENST00000491165 RD3LP0DJH9 198 aa18.57■□□□□ 0.56
USF3-203ENST00000491165 SSTR5P35346 364 aa18.57■□□□□ 0.56
USF3-203ENST00000491165 CDPF1Q6NVV7 123 aa18.57■□□□□ 0.56
USF3-203ENST00000491165 ZNF841Q6ZN19 808 aa18.57■□□□□ 0.56
USF3-203ENST00000491165 KRTAP1-3Q8IUG1 177 aa18.57■□□□□ 0.56
USF3-203ENST00000491165 HSD17B10Q99714 261 aaKnown RBP18.57■□□□□ 0.56
USF3-203ENST00000491165 SRD5A3Q9H8P0 318 aa18.57■□□□□ 0.56
USF3-203ENST00000491165 KAAG1Q9UBP8 84 aa18.57■□□□□ 0.56
USF3-203ENST00000491165 ZMAT5Q9UDW3 170 aaKnown RBP18.57■□□□□ 0.56
USF3-203ENST00000491165 PRRC2AP48634 2157 aaKnown RBP18.57■□□□□ 0.56
USF3-203ENST00000491165 PFN1P07737 140 aaKnown RBP18.56■□□□□ 0.56
USF3-203ENST00000491165 FABP4P15090 132 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 NOTCH2Q04721 2471 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 OR4F5Q8NH21 305 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 MBD6Q96DN6 1003 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 SNX22Q96L94 193 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 OR4F4Q96R69 305 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 ZFHX3Q15911 3703 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 LINC00473A8K010 186 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 VWC2LB2RUY7 222 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 C17orf112F2Z3M2 114 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 RPS16P62249 146 aaKnown RBP18.56■□□□□ 0.56
USF3-203ENST00000491165 EDDM3AQ14507 147 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 Q3ZCU0 254 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 TMEM155Q4W5P6 130 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 CLEC2AQ6UVW9 174 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 OR13A1Q8NGR1 328 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 RAB24Q969Q5 203 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 PITPNC1Q9UKF7 332 aa18.56■□□□□ 0.56
USF3-203ENST00000491165 IGHV3-43A0A0B4J1X8 118 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 DVL1O14640 695 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 IGHV3-43DP0DP04 118 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 GNB2P62879 340 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 GATAD1Q8WUU5 269 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 PYGO2Q9BRQ0 406 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 MARCH11A6NNE9 402 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 H7BYZ3 331 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 CLEC12BQ2HXU8 276 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 SPINK9Q5DT21 86 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 DNLZQ5SXM8 178 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 OR5B12Q96R08 314 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 SLC25A10Q9UBX3 287 aaPredicted RBP18.55■□□□□ 0.56
USF3-203ENST00000491165 PSG11Q9UQ72 335 aa18.55■□□□□ 0.56
USF3-203ENST00000491165 NKX6-3A6NJ46 265 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 ST8SIA5O15466 376 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 HIST1H1BP16401 226 aaKnown RBP18.54■□□□□ 0.56
USF3-203ENST00000491165 MDKP21741 143 aaPredicted RBP18.54■□□□□ 0.56
USF3-203ENST00000491165 GALR1P47211 349 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 LRRC75A-AS1Q8N1F1 130 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 NECAP1Q8NC96 275 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 OR4X1Q8NH49 305 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 DCTN5Q9BTE1 182 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 GFOD1Q9NXC2 390 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 GAB2Q9UQC2 676 aa18.54■□□□□ 0.56
USF3-203ENST00000491165 SETXQ7Z333 2677 aaKnown RBP18.54■□□□□ 0.56
USF3-203ENST00000491165 ITPR3Q14573 2671 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 IGHV4-61A0A0C4DH41 118 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 SPINT2O43291 252 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 GATCO43716 136 aaKnown RBP18.53■□□□□ 0.56
USF3-203ENST00000491165 TRAT1Q6PIZ9 186 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 OR51G1Q8NGK1 321 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 RFESDQ8TAC1 157 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 PIMREGQ9BSJ6 248 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 LINC00205P59089 165 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 ACOT6Q3I5F7 207 aaPredicted RBP18.53■□□□□ 0.56
USF3-203ENST00000491165 C9orf152Q5JTZ5 239 aa18.53■□□□□ 0.56
USF3-203ENST00000491165 NEIL1Q96FI4 390 aaPredicted RBP18.53■□□□□ 0.56
USF3-203ENST00000491165 PAGE4O60829 102 aa18.52■□□□□ 0.56
USF3-203ENST00000491165 EDDM3BP56851 147 aa18.52■□□□□ 0.56
USF3-203ENST00000491165 HTD2P86397 168 aa18.52■□□□□ 0.56
USF3-203ENST00000491165 Q5PR19 223 aa18.52■□□□□ 0.56
USF3-203ENST00000491165 R3HDM4Q96D70 268 aa18.52■□□□□ 0.56
USF3-203ENST00000491165 PACRGQ96M98 296 aaPredicted RBP18.52■□□□□ 0.56
USF3-203ENST00000491165 PRDM13Q9H4Q3 707 aa18.52■□□□□ 0.56
USF3-203ENST00000491165 PATZ1Q9HBE1 687 aaKnown RBP18.52■□□□□ 0.56
USF3-203ENST00000491165 NDUFS8O00217 210 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms