RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 HIF1ANQ9NWT6 349 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 PROCRQ9UNN8 238 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 PCDH15Q96QU1 1955 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 NKX6-3A6NJ46 265 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 TMPRSS2O15393 492 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 UMODP07911 640 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 MPV17P39210 176 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 VWA1Q6PCB0 445 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 KLF14Q8TD94 323 aaPredicted RBP10.76□□□□□ -0.69
SHOX2-205ENST00000490689 IMMP1LQ96LU5 166 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 LYZP61626 148 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 TMEM42Q69YG0 159 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 PCSK4Q6UW60 755 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 DHRS13Q6UX07 377 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 BPIFA4PQ86YQ2 179 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 RNASEH2CQ8TDP1 164 aaKnown RBP10.76□□□□□ -0.69
SHOX2-205ENST00000490689 TMEM45BQ96B21 275 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 NEU1Q99519 415 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 DECR2Q9NUI1 292 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 HSPB7Q9UBY9 170 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 LTBRP36941 435 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 HSPE1P61604 102 aaKnown RBP10.76□□□□□ -0.69
SHOX2-205ENST00000490689 HOXA4Q00056 320 aaPredicted RBP10.76□□□□□ -0.69
SHOX2-205ENST00000490689 HES1Q14469 280 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 TMEM14EPQ6UXP3 125 aa10.76□□□□□ -0.69
SHOX2-205ENST00000490689 PGPA6NDG6 321 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 PPOXP50336 477 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 ZNF585BQ52M93 769 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 SLC25A34Q6PIV7 304 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 ZNF114Q8NC26 417 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 EAF1Q96JC9 268 aaPredicted RBP10.75□□□□□ -0.69
SHOX2-205ENST00000490689 COMPP49747 757 aaPredicted RBP10.75□□□□□ -0.69
SHOX2-205ENST00000490689 HAPLN4Q86UW8 402 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 SEPSECSQ9HD40 501 aaKnown RBP10.75□□□□□ -0.69
SHOX2-205ENST00000490689 GAGE10A6NGK3 116 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 OR9G9P0C7N8 305 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
SHOX2-205ENST00000490689 CRIM1Q9NZV1 1036 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 WDR83OSQ9Y284 106 aa10.75□□□□□ -0.69
SHOX2-205ENST00000490689 FOXI3A8MTJ6 420 aaPredicted RBP10.74□□□□□ -0.69
SHOX2-205ENST00000490689 PSPNO60542 156 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 IGKV1-39P01597 117 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 IGKV1D-39P04432 117 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
SHOX2-205ENST00000490689 TRA2AQ13595 282 aaKnown RBP eCLIP10.74□□□□□ -0.69
SHOX2-205ENST00000490689 TDRG1Q3Y452 100 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 FAM201AQ5SY85 155 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 HCP5Q6MZN7 132 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 PRNDQ9UKY0 176 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 TEX50A0A1B0GTY4 177 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 ZNF324O75467 553 aaPredicted RBP10.74□□□□□ -0.69
SHOX2-205ENST00000490689 FOXL1Q12952 345 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 C19orf35Q6ZS72 473 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 KCNS1Q96KK3 526 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 CLEC5AQ9NY25 188 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 OR4C46A6NHA9 309 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 SFTPCP11686 197 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 BTF3P20290 206 aaKnown RBP10.74□□□□□ -0.69
SHOX2-205ENST00000490689 NTF4P34130 210 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 DNLZQ5SXM8 178 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 LDLRAD2Q5SZI1 272 aa10.74□□□□□ -0.69
SHOX2-205ENST00000490689 IGHV3-72A0A0B4J1Y9 119 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 PINLYPA6NC86 204 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 FOXH1O75593 365 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 FAM87AP0C7U9 286 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 PSG7Q13046 419 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 ZNF497Q6ZNH5 498 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 Q6ZVH6 145 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 RBFOX2O43251 390 aaKnown RBP eCLIP10.73□□□□□ -0.69
SHOX2-205ENST00000490689 NUPR1O60356 82 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 IGLV3-19P01714 112 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 REG1AP05451 166 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 EFNB3Q15768 340 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 DCAF10Q5QP82 559 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 Q6ZWC4 215 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 PPP1R32Q7Z5V6 425 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 WFDC8Q8IUA0 241 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 SAP25Q8TEE9 199 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 PRRC2CQ9Y520 2896 aaKnown RBP10.73□□□□□ -0.69
SHOX2-205ENST00000490689 KIR2DS2P43631 304 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 NMUP48645 174 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 PRNTQ86SH4 94 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 MOB3BQ86TA1 216 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 CCL17Q92583 94 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 AGMATQ9BSE5 352 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 ARRDC1-AS1Q9H2J1 176 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 ZFP30Q9Y2G7 519 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 TMEM177Q53S58 311 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 ASPHD1Q5U4P2 390 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 SARAFQ96BY9 339 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 CCL13Q99616 98 aa10.73□□□□□ -0.69
SHOX2-205ENST00000490689 TRBV9A0A0B4J1U6 114 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 hADV38S2A0JD32 116 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 TMEM210A6NLX4 147 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 TNFAIP6P98066 277 aaPredicted RBP10.72□□□□□ -0.69
SHOX2-205ENST00000490689 ASCL4Q6XD76 172 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 ZNF841Q6ZN19 808 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 LHFPL4Q7Z7J7 247 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms