RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 OR4B1Q8NGF8 309 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 TAF15Q92804 592 aaKnown RBP eCLIP11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGHV3-49A0A0A0MS15 119 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 PITX3O75364 302 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 CXorf1O96002 111 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 COL8A1P27658 744 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 TUSC1Q2TAM9 212 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 LRRC75BQ2VPJ9 315 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 OR5AU1Q8NGC0 362 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 RBFOX3A6NFN3 312 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 G3V3Q6 166 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 ATP5IP56385 69 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 KLRD1Q13241 179 aa11.95□□□□□ -0.5
ARHGEF39-205ENST00000490638 H0Y8G0 127 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 CA2P00918 260 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 IL4P05112 153 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGHV1-8P0DP01 117 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 AANATQ16613 207 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 CYB5R2Q6BCY4 276 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 LYPD2Q6UXB3 125 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 TNFRSF14Q92956 283 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 NKX6-2Q9C056 277 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 RELQ04864 619 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 SRSF12Q8WXF0 261 aaKnown RBP11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 MANBALQ9NQG1 85 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 TMEM56-RWDD3S4R434 201 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 NHLRC3Q5JS37 347 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 A0A0A6YYD4 124 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 CFDP00746 253 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 SFTA3P0C7M3 94 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 RNF144BQ7Z419 303 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 GFI1Q99684 422 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 DNAJC4Q9NNZ3 241 aa11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 LYRM2Q9NU23 88 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-205ENST00000490638 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGKV1D-8A0A087WSZ0 117 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 C20orf202A1L168 122 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 NDUFS8O00217 210 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGHV3-23P01764 117 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 RND3P61587 244 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 LINC00527Q9UJ94 153 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 DKK1O94907 266 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 RPL7P18124 248 aaKnown RBP11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 GPR183P32249 361 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 HOXA4Q00056 320 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 VMO1Q7Z5L0 202 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 SMIM8Q96KF7 97 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 TXN2Q99757 166 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 BPTFQ12830 3046 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGKV1D-17A0A075B6S4 117 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 CGB1A6NKQ9 187 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 NTF3P20783 257 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 PQLC2Q6ZP29 291 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 ZNF738Q8NE65 137 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 AP1S3Q96PC3 154 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 VAX2Q9UIW0 290 aa11.93□□□□□ -0.5
ARHGEF39-205ENST00000490638 H3BUX3 64 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 ZNF735P0CB33 412 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 H2BFSP57053 126 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 TMEM88Q6PEY1 159 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 OR51G1Q8NGK1 321 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 ABCA12Q86UK0 2595 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 XIRP2A4UGR9 3374 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGHV3OR16-8A0A075B7F1 116 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 WNT2P09544 360 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 RPL30P62888 115 aaKnown RBP11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 TMEM155Q4W5P6 130 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 TMEM78Q5T7P6 136 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 TMEM219Q86XT9 240 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 HELTA6NFD8 242 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 ZNF207O43670 478 aaKnown RBP11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 ZNF503-AS2A6NEH8 195 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 PPP1R2P9O14990 202 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 ZNF345Q14585 488 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 C9orf62Q8N4C0 152 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 DCAF16Q9NXF7 216 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 DKK4Q9UBT3 224 aa11.92□□□□□ -0.5
ARHGEF39-205ENST00000490638 TRAV20A0A0B4J274 112 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 AP4M1O00189 453 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 MPZP25189 248 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 DUTP33316 252 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 CAMPP49913 170 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 LINC01356Q8N9X3 169 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 C8orf46Q8TAG6 207 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 TMSB15BA0A087X1C1 80 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 SDHCQ99643 169 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 RTBDNQ9BSG5 229 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 TMEM204Q9BSN7 226 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 OBSL1O75147 1896 aa11.91□□□□□ -0.5
ARHGEF39-205ENST00000490638 IGLV1-44P01699 117 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 VDAC2P45880 294 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms