RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 OR52E5Q8NH55 327 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 SGMS2Q8NHU3 365 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 OSR1Q8TAX0 266 aaPredicted RBP12.55□□□□□ -0.4
PCCB-218ENST00000490504 LRRC20Q8TCA0 184 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 DTD1Q8TEA8 209 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 GINS3Q9BRX5 216 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 AMMECR1Q9Y4X0 333 aaPredicted RBP12.55□□□□□ -0.4
PCCB-218ENST00000490504 CEBPZOSA8MTT3 80 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 H7C2Y5 167 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 IGKV1-16P04430 117 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 COX7A1P24310 79 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 UBE2E1P51965 193 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 SPCS3P61009 180 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 ZNF429Q86V71 674 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 PDPNQ86YL7 162 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 TMEM217Q8N7C4 229 aa12.55□□□□□ -0.4
PCCB-218ENST00000490504 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 SHOXO15266 292 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 IFNA17P01571 189 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 CRYBA1P05813 215 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 FBP1P09467 338 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 RAB13P51153 203 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 DIAPH2-AS1Q14236 149 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 PDLIM3Q53GG5 364 aaPredicted RBP12.54□□□□□ -0.4
PCCB-218ENST00000490504 TMEM177Q53S58 311 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 SPANXN5Q5MJ07 72 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 COMMD7Q86VX2 200 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 STPG2Q8N412 459 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 RNF141Q8WVD5 230 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 CXorf58Q96LI9 332 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 ATP5SQ99766 215 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 MED9Q9NWA0 146 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 WASHC3Q9Y3C0 194 aa12.54□□□□□ -0.4
PCCB-218ENST00000490504 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 LEUTXA8MZ59 168 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 BUB1B-PAK6H3BSN5 160 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 FGF16O43320 207 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 DFFBO76075 338 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 METTL15P1P0C7V9 234 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 MC5RP33032 325 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 SAA4P35542 130 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 HBG1P69891 147 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 HBG2P69892 147 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 TMEM14EPQ6UXP3 125 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 C17orf50Q8WW18 174 aa12.53□□□□□ -0.4
PCCB-218ENST00000490504 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
PCCB-218ENST00000490504 FOXA2Q9Y261 457 aaPredicted RBP12.53□□□□□ -0.4
PCCB-218ENST00000490504 MGAM2Q2M2H8 2515 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 FBXO24O75426 580 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 NDUFA7O95182 113 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 IL6RP08887 468 aaPredicted RBP12.52□□□□□ -0.4
PCCB-218ENST00000490504 SPINK9Q5DT21 86 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 OR4P4Q8NGL7 312 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 OR4F5Q8NH21 305 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 HARBI1Q96MB7 349 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 OR4C12Q96R67 309 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 CITED4Q96RK1 184 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 CLCC1Q96S66 551 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 TMEM14BQ9NUH8 114 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 BET1LQ9NYM9 111 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 PFDN2Q9UHV9 154 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 PRNDQ9UKY0 176 aa12.52□□□□□ -0.4
PCCB-218ENST00000490504 STRAPQ9Y3F4 350 aaKnown RBP12.52□□□□□ -0.4
PCCB-218ENST00000490504 SRRM4A7MD48 611 aaKnown RBP12.51□□□□□ -0.41
PCCB-218ENST00000490504 UPK2O00526 184 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 SAA1P0DJI8 122 aaPredicted RBP12.51□□□□□ -0.41
PCCB-218ENST00000490504 SPP1P10451 314 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 OR11H6Q8NGC7 330 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 AJUBAQ96IF1 538 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 TSNAXQ99598 290 aaKnown RBP12.51□□□□□ -0.41
PCCB-218ENST00000490504 TCF19Q9Y242 345 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 CMYA5Q8N3K9 4069 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 SCAF4O95104 1147 aaKnown RBP12.51□□□□□ -0.41
PCCB-218ENST00000490504 SULT1A2P50226 295 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 HAPLN4Q86UW8 402 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
PCCB-218ENST00000490504 HSD17B11Q8NBQ5 300 aa12.51□□□□□ -0.41
PCCB-218ENST00000490504 A0A1B0GUS0 222 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 CLPSL1A2RUU4 121 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 LY6LH3BQJ8 138 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 IFNA5P01569 189 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 ARG1P05089 322 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 FGF2P09038 288 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
PCCB-218ENST00000490504 HSPE1P61604 102 aaKnown RBP12.5□□□□□ -0.41
PCCB-218ENST00000490504 RPS16P62249 146 aaKnown RBP12.5□□□□□ -0.41
PCCB-218ENST00000490504 RPP30P78346 268 aaKnown RBP12.5□□□□□ -0.41
PCCB-218ENST00000490504 ARL16Q0P5N6 197 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 LILRB2Q8N423 598 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 RPEQ96AT9 228 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 SAT2Q96F10 170 aaPredicted RBP12.5□□□□□ -0.41
PCCB-218ENST00000490504 HIPK2Q9H2X6 1198 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 FKBP11Q9NYL4 201 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 OR51B2Q9Y5P1 312 aa12.5□□□□□ -0.41
PCCB-218ENST00000490504 IGHV1-3A0A0C4DH29 117 aa12.49□□□□□ -0.41
PCCB-218ENST00000490504 ZNF705EA8MWA4 302 aaPredicted RBP12.49□□□□□ -0.41
PCCB-218ENST00000490504 KBTBD11O94819 623 aa12.49□□□□□ -0.41
PCCB-218ENST00000490504 PAX6P26367 422 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms