RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 TTC9CQ8N5M4 171 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 SLC35G3Q8N808 338 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 OR4F17Q8NGA8 305 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 CASTOR1Q8WTX7 329 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 LSM10Q969L4 123 aaKnown RBP8.49□□□□□ -1.05
VPS13D-210ENST00000489961 OR4F4Q96R69 305 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 PDCD10Q9BUL8 212 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 HINT2Q9BX68 163 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 KLK15Q9H2R5 256 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 NUDT15Q9NV35 164 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 SHPKQ9UHJ6 478 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 ZNF257Q9Y2Q1 563 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 TRAV6A0A075B6T7 132 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 A0A1B0GW64 132 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 C9orf170A2RU37 121 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 NPIPB5A8MRT5 1133 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 BRI3O95415 125 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 H2AFB2P0C5Z0 115 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 ANXA7P20073 488 aaKnown RBP8.48□□□□□ -1.05
VPS13D-210ENST00000489961 PSMB6P28072 239 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 CDX1P47902 265 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-210ENST00000489961 MECP2P51608 486 aaKnown RBP8.48□□□□□ -1.05
VPS13D-210ENST00000489961 IZUMO4Q1ZYL8 232 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 ANKRD55Q3KP44 614 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 LYG2Q86SG7 212 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 ZNF491Q8N8L2 437 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 LRTM2Q8N967 370 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 KLHL30-AS1Q8NEE0 82 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 MYOZ3Q8TDC0 251 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 GPR146Q96CH1 333 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 UBE2E2Q96LR5 201 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 MS4A10Q96PG2 267 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 ALX4Q9H161 411 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-210ENST00000489961 NDUFA4L2Q9NRX3 87 aa8.48□□□□□ -1.05
VPS13D-210ENST00000489961 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.48□□□□□ -1.05
VPS13D-210ENST00000489961 A0A0B4J293 547 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 A0A0G2JLM5 398 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 A0A0G2JRQ6 117 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 IGLC7A0M8Q6 106 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 DBX1A6NMT0 343 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 CYB5BO43169 146 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 IFNA17P01571 189 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 CRYGCP07315 174 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 DEFA4P12838 97 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 AREGP15514 252 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 CTRB1P17538 263 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 HSPE1P61604 102 aaKnown RBP8.47□□□□□ -1.05
VPS13D-210ENST00000489961 PRCDQ00LT1 54 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 DHRS2Q13268 280 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 CTRB2Q6GPI1 263 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 LYZL2Q7Z4W2 148 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 OR10W1Q8NGF6 305 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 COQ8AQ8NI60 647 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 C4orf3Q8WVX3 66 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 CACNG5Q9UF02 275 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 CACFD1Q9UGQ2 172 aa8.47□□□□□ -1.05
VPS13D-210ENST00000489961 C13orf42A0A1B0GVH6 325 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 ST8SIA3O43173 380 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 DUS4LO95620 317 aaKnown RBP8.46□□□□□ -1.06
VPS13D-210ENST00000489961 TSPAN15O95858 294 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 REG1AP05451 166 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 SULT1A3P0DMM9 295 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 SULT1A4P0DMN0 295 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 OR13C7P0DN81 318 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 HIST1H1BP16401 226 aaKnown RBP8.46□□□□□ -1.06
VPS13D-210ENST00000489961 KIAA0141Q14154 515 aaPredicted RBP8.46□□□□□ -1.06
VPS13D-210ENST00000489961 NMSQ5H8A3 153 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 PRR31Q5SQ13 230 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 PLET1Q6UQ28 207 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 Q6ZRM9 215 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 C8orf86Q6ZUL3 223 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 DUSP18Q8NEJ0 188 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 USMG5Q96IX5 58 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 PLEKHA3Q9HB20 300 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 ENY2Q9NPA8 101 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 TMED3Q9Y3Q3 217 aa8.46□□□□□ -1.06
VPS13D-210ENST00000489961 A0A1B0GU03 582 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 FAM223BA6NKX1 122 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 PF4P02776 101 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 PRH1P02810 166 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 HOXB5P09067 269 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 SPCS3P61009 180 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 ERHP84090 104 aaKnown RBP8.45□□□□□ -1.06
VPS13D-210ENST00000489961 RHOGP84095 191 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 WT1-ASQ06250 92 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 SMCO1Q147U7 214 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 C18orf65Q6ZTR6 163 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 NRARPQ7Z6K4 114 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 FAM223AQ8IWN6 122 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 NECAP1Q8NC96 275 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 OR1L6Q8NGR2 347 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 OR52E5Q8NH55 327 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 OR1S1Q8NH92 325 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 GNB4Q9HAV0 340 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 PALMDQ9NP74 551 aa8.45□□□□□ -1.06
VPS13D-210ENST00000489961 THYN1Q9P016 225 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms