RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 YTHDF2Q9Y5A9 579 aaKnown RBP10.42□□□□□ -0.74
UFD1-209ENST00000489406 PKHD1L1Q86WI1 4243 aa10.41□□□□□ -0.74
UFD1-209ENST00000489406 FKBP6O75344 327 aa10.41□□□□□ -0.74
UFD1-209ENST00000489406 FGF9P31371 208 aaPredicted RBP10.41□□□□□ -0.74
UFD1-209ENST00000489406 RPL22L1Q6P5R6 122 aaKnown RBP10.41□□□□□ -0.74
UFD1-209ENST00000489406 CBR4Q8N4T8 237 aa10.41□□□□□ -0.74
UFD1-209ENST00000489406 OR10J5Q8NHC4 309 aa10.41□□□□□ -0.74
UFD1-209ENST00000489406 GRAMD2BQ96HH9 432 aa10.41□□□□□ -0.74
UFD1-209ENST00000489406 RAB40CQ96S21 281 aa10.41□□□□□ -0.74
UFD1-209ENST00000489406 ATP6V0BQ99437 205 aa10.41□□□□□ -0.74
UFD1-209ENST00000489406 TMEM59Q9BXS4 323 aa10.41□□□□□ -0.74
UFD1-209ENST00000489406 CYB5BO43169 146 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 DNAH10OSP0CZ25 163 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 ASIPP42127 132 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 RPL30P62888 115 aaKnown RBP10.4□□□□□ -0.74
UFD1-209ENST00000489406 KCTD9Q7L273 389 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 OR10W1Q8NGF6 305 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 OR4A4PQ8NGN8 299 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 CIB1Q99828 191 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 FNDC4Q9H6D8 234 aaPredicted RBP10.4□□□□□ -0.74
UFD1-209ENST00000489406 C12orf4Q9NQ89 552 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 GHRLQ9UBU3 117 aa10.4□□□□□ -0.74
UFD1-209ENST00000489406 MRPS7Q9Y2R9 242 aaKnown RBP10.4□□□□□ -0.74
UFD1-209ENST00000489406 A0A0A6YYD4 124 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 TRBV5-5A0A0J9YX44 114 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 FABP7O15540 132 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 DCTN3O75935 186 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 P0C879 139 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 CELP19835 753 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 GNRHRP30968 328 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 RNASE12Q5GAN4 147 aaKnown RBP10.39□□□□□ -0.75
UFD1-209ENST00000489406 ARHGAP24Q8N264 748 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 UHRF2Q96PU4 802 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 KCNK15Q9H427 330 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 PRELID3BQ9Y3B1 194 aa10.39□□□□□ -0.75
UFD1-209ENST00000489406 TRBV6-7A0A0A0MS04 114 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 AQP12BA6NM10 295 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 F5H768 121 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 G3V2T6 193 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 SOCS1O15524 211 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 Q499Y3 187 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 TMEM69Q5SWH9 247 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 AQP12AQ8IXF9 295 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 GDPD1Q8N9F7 314 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 RNF141Q8WVD5 230 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 GINS3Q9BRX5 216 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 TMEM70Q9BUB7 260 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 TM2D1Q9BX74 207 aa10.38□□□□□ -0.75
UFD1-209ENST00000489406 A0A087WTM6 91 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 LOC102723971A0A1B0GUV8 181 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 J3QRK9 145 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 K7EIM0 57 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 OR13C7P0DN81 318 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 HOXB6P17509 224 aaKnown RBP10.37□□□□□ -0.75
UFD1-209ENST00000489406 FXYD7P58549 80 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 CCDC58Q4VC31 144 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 PSMG4Q5JS54 123 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 TRUB1Q8WWH5 349 aaKnown RBP10.37□□□□□ -0.75
UFD1-209ENST00000489406 CMSS1Q9BQ75 279 aaKnown RBP10.37□□□□□ -0.75
UFD1-209ENST00000489406 UQCC2Q9BRT2 126 aa10.37□□□□□ -0.75
UFD1-209ENST00000489406 UBBP0CG47 229 aa10.36□□□□□ -0.75
UFD1-209ENST00000489406 UNC119Q13432 240 aa10.36□□□□□ -0.75
UFD1-209ENST00000489406 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
UFD1-209ENST00000489406 OR4S2Q8NH73 311 aa10.36□□□□□ -0.75
UFD1-209ENST00000489406 CABLES2Q9BTV7 478 aa10.36□□□□□ -0.75
UFD1-209ENST00000489406 HRASLSQ9HDD0 168 aa10.36□□□□□ -0.75
UFD1-209ENST00000489406 HSF4Q9ULV5 492 aa10.36□□□□□ -0.75
UFD1-209ENST00000489406 SERPINE2P07093 398 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 ALDH3B2P48448 385 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 TAS2R43P59537 309 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 RPS11P62280 158 aaKnown RBP eCLIP10.35□□□□□ -0.75
UFD1-209ENST00000489406 MEDAGQ5VYS4 303 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 TOMM20LQ6UXN7 152 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 SPATA24Q86W54 205 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 DCANP1Q8TF63 244 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 GINS4Q9BRT9 223 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 NXF2Q9GZY0 626 aaKnown RBP10.35□□□□□ -0.75
UFD1-209ENST00000489406 AMBNQ9NP70 447 aa10.35□□□□□ -0.75
UFD1-209ENST00000489406 TRAV3A0A0B4J244 114 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 SNTNA6NMZ2 147 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 H3BMM0 161 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 HRASP01112 189 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 WT1-ASQ06250 92 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 NKAIN3Q8N8D7 197 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 SMIM19Q96E16 107 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 SLC29A1Q99808 456 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 GABARAPL3Q9BY60 117 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 COMMD5Q9GZQ3 224 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 TMEM231Q9H6L2 316 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 BET1LQ9NYM9 111 aa10.34□□□□□ -0.75
UFD1-209ENST00000489406 DNAH8Q96JB1 4490 aa10.33□□□□□ -0.76
UFD1-209ENST00000489406 OGG1O15527 345 aa10.33□□□□□ -0.76
UFD1-209ENST00000489406 HBE1P02100 147 aa10.33□□□□□ -0.76
UFD1-209ENST00000489406 LIMS3P0CW19 117 aa10.33□□□□□ -0.76
UFD1-209ENST00000489406 LIMS4P0CW20 117 aa10.33□□□□□ -0.76
UFD1-209ENST00000489406 DEFB130BP0DP73 79 aa10.33□□□□□ -0.76
UFD1-209ENST00000489406 DEFB130AP0DP74 79 aa10.33□□□□□ -0.76
UFD1-209ENST00000489406 TIMM50Q3ZCQ8 353 aa10.33□□□□□ -0.76
UFD1-209ENST00000489406 ZNF773Q6PK81 442 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms