RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 SIGLEC8Q9NYZ4 499 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 OR51B2Q9Y5P1 312 aa10.6□□□□□ -0.71
VTI1A-206ENST00000489142 IGKV1-39P01597 117 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 IGKV1D-39P04432 117 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 CLEC3BP05452 202 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 ALDH3B2P48448 385 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 MFAP2P55001 183 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 CD81P60033 236 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 GUCA2BQ16661 112 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 KLK9Q2XQG4 91 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 DEFB114Q30KQ6 69 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 UNQ9165/PRO28630Q6UXU0 137 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 GDPD1Q8N9F7 314 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 OR4D10Q8NGI6 311 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 OR1L8Q8NGR8 309 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 ZNF502Q8TBZ5 544 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 WDR89Q96FK6 387 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-206ENST00000489142 ABHD1Q96SE0 405 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 ZMAT4Q9H898 229 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 NDUFA4L2Q9NRX3 87 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 KLK9Q9UKQ9 250 aa10.59□□□□□ -0.71
VTI1A-206ENST00000489142 KMT2CQ8NEZ4 4911 aaKnown RBP10.59□□□□□ -0.71
VTI1A-206ENST00000489142 TRBV7-1A0A0A6YYK4 115 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 TMEM213A2RRL7 107 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 ZNF785A8K8V0 405 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 LGALS9O00182 355 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 SNAPC5O75971 98 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 CD3DP04234 171 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 SERPINE2P07093 398 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 CD7P09564 240 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 PGAM2P15259 253 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 S100GP29377 79 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 PPP5CP53041 499 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 IZUMO4Q1ZYL8 232 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 TM4SF20Q53R12 229 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 FAM209BQ5JX69 171 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 GPHB5Q86YW7 130 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 LAX1Q8IWV1 398 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 SLC38A6Q8IZM9 456 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 MRGPRFQ96AM1 343 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 CXorf58Q96LI9 332 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 TM2D3Q9BRN9 247 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 MIXL1Q9H2W2 232 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 TUBA4BQ9H853 241 aa10.58□□□□□ -0.72
VTI1A-206ENST00000489142 OR2T8A6NH00 312 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 CTDSP2O14595 271 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 RGS5O15539 181 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 IFNA6P05013 189 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 CBLN1P23435 193 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 HAGHQ16775 308 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 FAM106AQ4KMX7 169 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 RNASE10Q5GAN6 216 aaKnown RBP10.57□□□□□ -0.72
VTI1A-206ENST00000489142 LPCAT3Q6P1A2 487 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 CLVS1Q8IUQ0 354 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-206ENST00000489142 LSM10Q969L4 123 aaKnown RBP10.57□□□□□ -0.72
VTI1A-206ENST00000489142 NEURL2Q9BR09 285 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
VTI1A-206ENST00000489142 MLXQ9UH92 298 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 PRNDQ9UKY0 176 aa10.57□□□□□ -0.72
VTI1A-206ENST00000489142 IGHV3OR16-8A0A075B7F1 116 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 C15orf61A6NNL5 157 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 A8MZ25 164 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 FGF2P09038 288 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 UCP3P55916 312 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 SPINK9Q5DT21 86 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 FAAP20Q6NZ36 180 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 PLET1Q6UQ28 207 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 BTNL8Q6UX41 500 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 H2BFWTQ7Z2G1 175 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 DEFB125Q8N687 156 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 UBAC2Q8NBM4 344 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 UXS1Q8NBZ7 420 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 OR2K2Q8NGT1 345 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 RETNQ9HD89 108 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 TMEM14BQ9NUH8 114 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 THYN1Q9P016 225 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 MTFP1Q9UDX5 166 aa10.56□□□□□ -0.72
VTI1A-206ENST00000489142 F11RQ9Y624 299 aaKnown RBP10.56□□□□□ -0.72
VTI1A-206ENST00000489142 A8MWP6 167 aa10.55□□□□□ -0.72
VTI1A-206ENST00000489142 TGOLN2O43493 480 aa10.55□□□□□ -0.72
VTI1A-206ENST00000489142 SCAF4O95104 1147 aaKnown RBP10.55□□□□□ -0.72
VTI1A-206ENST00000489142 PTBP1P26599 531 aaKnown RBP eCLIP10.55□□□□□ -0.72
VTI1A-206ENST00000489142 PIGPP57054 158 aa10.55□□□□□ -0.72
VTI1A-206ENST00000489142 SCGB2B2Q4G0G5 96 aa10.55□□□□□ -0.72
VTI1A-206ENST00000489142 THOC7Q6I9Y2 204 aaKnown RBP10.55□□□□□ -0.72
VTI1A-206ENST00000489142 LHFPL1Q86WI0 220 aa10.55□□□□□ -0.72
VTI1A-206ENST00000489142 OR4A16Q8NH70 328 aa10.55□□□□□ -0.72
VTI1A-206ENST00000489142 TP53RKQ96S44 253 aa10.55□□□□□ -0.72
VTI1A-206ENST00000489142 TECRQ9NZ01 308 aaKnown RBP10.55□□□□□ -0.72
VTI1A-206ENST00000489142 DNAH7Q8WXX0 4024 aa10.55□□□□□ -0.72
VTI1A-206ENST00000489142 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-206ENST00000489142 CYB5BO43169 146 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 ZNF207O43670 478 aaKnown RBP10.54□□□□□ -0.72
VTI1A-206ENST00000489142 TPPPO94811 219 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 IGHV3-48P01763 117 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 SP6Q3SY56 376 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms