RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TAS2R30P59541 319 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 HILS1P60008 231 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 S100A10P60903 97 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 NDPQ00604 133 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 FXYD3Q14802 87 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 LRRC37A5PQ49AS3 106 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 DTD1Q8TEA8 209 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 SMIM8Q96KF7 97 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 HSPB9Q9BQS6 159 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 OR5AC2Q9NZP5 309 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 CEBPZOSA8MTT3 80 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 GPR137BO60478 399 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 TMEM50AO95807 157 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 IGHG2P01859 326 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 OPN1MWP04001 364 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 OPN1MW2P0DN77 364 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 OPN1MW3P0DN78 364 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 CRIP2P52943 208 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-208ENST00000488989 TMEM65Q6PI78 240 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 HSD17B13Q7Z5P4 300 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-208ENST00000488989 ARPC1AQ92747 370 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 CIB3Q96Q77 187 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-208ENST00000488989 PLEKHA3Q9HB20 300 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 MBD2Q9UBB5 411 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 WSB1Q9Y6I7 421 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 MAST4O15021 2626 aa12.66□□□□□ -0.38
CLDN11-208ENST00000488989 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 E5RGE8 158 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 KCNAB3O43448 404 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 SSSCA1O60232 199 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 CNIH1O95406 144 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 RNASE1P07998 156 aaKnown RBP12.65□□□□□ -0.38
CLDN11-208ENST00000488989 EGR2P11161 476 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-208ENST00000488989 PVALBP20472 110 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-208ENST00000488989 RPL15P61313 204 aaKnown RBP12.65□□□□□ -0.38
CLDN11-208ENST00000488989 GNB1P62873 340 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 BLCAPP62952 87 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 SPINK9Q5DT21 86 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 OR11H4Q8NGC9 324 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 THAP6Q8TBB0 222 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 PPP1R14BQ96C90 147 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 JMJD8Q96S16 334 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 TNFRSF19Q9NS68 423 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 ZNF580Q9UK33 172 aa12.65□□□□□ -0.38
CLDN11-208ENST00000488989 SH2D7A6NKC9 451 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-208ENST00000488989 HMSDA8MTL9 139 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 TSC22D2O75157 780 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 IAPPP10997 89 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 P2RY1P47900 373 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 HOXA1P49639 335 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-208ENST00000488989 WT1-ASQ06250 92 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 BSXQ3C1V8 233 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 MRPL41Q8IXM3 137 aaKnown RBP12.64□□□□□ -0.39
CLDN11-208ENST00000488989 OR2C3Q8N628 320 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 OR10W1Q8NGF6 305 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 SGMS2Q8NHU3 365 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 HINT2Q9BX68 163 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 NPFFR1Q9GZQ6 430 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 ENY2Q9NPA8 101 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
CLDN11-208ENST00000488989 MSGN1A6NI15 193 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 L7N2F9 121 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 IGF1P05019 195 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 ATP5IP56385 69 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-208ENST00000488989 RPL23AP62750 156 aaKnown RBP12.63□□□□□ -0.39
CLDN11-208ENST00000488989 VAMP2P63027 116 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 ERHP84090 104 aaKnown RBP12.63□□□□□ -0.39
CLDN11-208ENST00000488989 ASPHD1Q5U4P2 390 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 Q8N2B8 174 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 ZNF114Q8NC26 417 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 GRPEL2Q8TAA5 225 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 HYLS1Q96M11 299 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 DUX5Q96PT3 197 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 HIPK2Q9H2X6 1198 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 LYRM2Q9NU23 88 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-208ENST00000488989 PSENENQ9NZ42 101 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 U3KQ87 197 aa12.63□□□□□ -0.39
CLDN11-208ENST00000488989 LINC01548A6NM66 108 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 ATP6V0E1O15342 81 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 CRYGCP07315 174 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 UBA52P62987 128 aaKnown RBP12.62□□□□□ -0.39
CLDN11-208ENST00000488989 ZFP69Q49AA0 526 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 C19orf54Q5BKX5 351 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 TMEM14EPQ6UXP3 125 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 Q6ZS46 218 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 SLC35E3Q7Z769 313 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 NOXA1Q86UR1 476 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 FAM103A1Q9BTL3 118 aaKnown RBP12.62□□□□□ -0.39
CLDN11-208ENST00000488989 PRSS22Q9GZN4 317 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 ZNF702PQ9H963 129 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-208ENST00000488989 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
CLDN11-208ENST00000488989 FXYD6-FXYD2A0A087WZ82 144 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 NPIPB5A8MRT5 1133 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 TRIM77I1YAP6 450 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 RNASE2P10153 161 aaKnown RBP12.61□□□□□ -0.39
CLDN11-208ENST00000488989 AREGP15514 252 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 CTRB1P17538 263 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms