RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 UBAC2Q8NBM4 344 aa11.81□□□□□ -0.52
ERGIC3-217ENST00000488935 OR4A5Q8NH83 315 aa11.81□□□□□ -0.52
ERGIC3-217ENST00000488935 C20orf24Q9BUV8 137 aa11.81□□□□□ -0.52
ERGIC3-217ENST00000488935 QTRT1Q9BXR0 403 aaKnown RBP11.81□□□□□ -0.52
ERGIC3-217ENST00000488935 IGHV3-49A0A0A0MS15 119 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 RLN1P04808 185 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 TRAPPC2P0DI81 140 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 TRAPPC2BP0DI82 140 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 PTBP1P26599 531 aaKnown RBP eCLIP11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 LPAR6P43657 344 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 CATR1Q13166 79 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 OR2C3Q8N628 320 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 OR5AP2Q8NGF4 316 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 LINC00476Q8WZB0 136 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 ZNF436Q9C0F3 470 aaPredicted RBP11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 EHFQ9NZC4 300 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 MRPL27Q9P0M9 148 aaKnown RBP11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 UFC1Q9Y3C8 167 aa11.8□□□□□ -0.52
ERGIC3-217ENST00000488935 IGKV3-7A0A075B6H7 116 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 DBX1A6NMT0 343 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 RBFOX2O43251 390 aaKnown RBP eCLIP11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 MRPS14O60783 128 aaKnown RBP11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 KRASP01116 189 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 IGHV3-48P01763 117 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 G6PCP35575 357 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 HERV-K104P61576 105 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 POU2AF1Q16633 256 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 ODF3L2Q3SX64 289 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 LYG2Q86SG7 212 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 ZBTB34Q8NCN2 500 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 OR5B3Q8NH48 314 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 GIMAP1Q8WWP7 306 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 FCAMRQ8WWV6 532 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 TMEM190Q8WZ59 177 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 FCGR1BQ92637 280 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 ZNF2Q9BSG1 426 aaPredicted RBP11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 DIABLOQ9NR28 239 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 ETV7Q9Y603 341 aa11.79□□□□□ -0.52
ERGIC3-217ENST00000488935 IGHV3OR16-13A0A075B7E8 117 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 IGHV3-74A0A0B4J1X5 117 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 F8W735 103 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 SPRY2O43597 315 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 PGLYRP1O75594 196 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 SERPINE2P07093 398 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 ADMP35318 185 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 TFPI2P48307 235 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 LSM3P62310 102 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 ANKRD55Q3KP44 614 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 APRG1Q8IVJ8 170 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 SCARB1Q8WTV0 552 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 ZNF414Q96IQ9 312 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 PLEKHA2Q9HB19 425 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 IFT46Q9NQC8 304 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 OR51B2Q9Y5P1 312 aa11.78□□□□□ -0.52
ERGIC3-217ENST00000488935 TRAV25A0A0B4J276 109 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 MARCH11A6NNE9 402 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 CTSDP07339 412 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 FCGR2BP31994 310 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 TNFRSF9Q07011 255 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 MSMO1Q15800 293 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 Q56UQ5 140 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 SLC38A6Q8IZM9 456 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 OR1L8Q8NGR8 309 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 MARC2Q969Z3 335 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 AIFM2Q9BRQ8 373 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 C5orf66Q9H5L9 145 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 NDUFA4L2Q9NRX3 87 aa11.77□□□□□ -0.53
ERGIC3-217ENST00000488935 K7EIM0 57 aa11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 ERVK-16P61578 105 aa11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 PHLDA2Q53GA4 152 aa11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 YTHDF1Q9BYJ9 559 aaKnown RBP11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 C21orf62Q9NYP8 219 aa11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 THYN1Q9P016 225 aa11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 F11RQ9Y624 299 aaKnown RBP11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 DNAH10Q8IVF4 4471 aa11.76□□□□□ -0.53
ERGIC3-217ENST00000488935 TSPAN4O14817 238 aa11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 XRCC3O43542 346 aa11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 F2RP25116 425 aa11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 ELLP55199 621 aaPredicted RBP11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 TAS2R20P59543 309 aa11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 GBGT1Q8N5D6 347 aa11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 RPP25LQ8N5L8 163 aaKnown RBP11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 DGCR14Q96DF8 476 aaKnown RBP11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 RNF2Q99496 336 aa11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 SPAG8Q99932 426 aaPredicted RBP11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 DAZ1Q9NQZ3 744 aaKnown RBP11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 COMMD9Q9P000 198 aa11.75□□□□□ -0.53
ERGIC3-217ENST00000488935 RPS19P39019 145 aaKnown RBP11.74□□□□□ -0.53
ERGIC3-217ENST00000488935 CBX5P45973 191 aa11.74□□□□□ -0.53
ERGIC3-217ENST00000488935 APOC4P55056 127 aa11.74□□□□□ -0.53
ERGIC3-217ENST00000488935 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
ERGIC3-217ENST00000488935 SPINK9Q5DT21 86 aa11.74□□□□□ -0.53
ERGIC3-217ENST00000488935 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
ERGIC3-217ENST00000488935 DHRS11Q6UWP2 260 aa11.74□□□□□ -0.53
ERGIC3-217ENST00000488935 LYSMD2Q8IV50 215 aa11.74□□□□□ -0.53
ERGIC3-217ENST00000488935 SAMD12Q8N8I0 201 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms