RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 OR5B3Q8NH48 314 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 TMEM167AQ8TBQ9 72 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 KRTAP3-3Q9BYR6 98 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 HIPK2Q9H2X6 1198 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 C7orf69Q9H7B7 122 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 HIF1ANQ9NWT6 349 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR51B2Q9Y5P1 312 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 ARHGAP32A7KAX9 2087 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 TRAV3A0A0B4J244 114 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 MOSP00540 346 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 IGLV2-23P01705 113 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 HOXA1P49639 335 aaPredicted RBP9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 PAX9P55771 341 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 RPL8P62917 257 aaKnown RBP9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 LDLRAD2Q5SZI1 272 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 MMD2Q8IY49 270 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR2T10Q8NGZ9 312 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 CFHR4Q92496 578 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 COMMD5Q9GZQ3 224 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 FBXL17Q9UF56 701 aa9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 STRAPQ9Y3F4 350 aaKnown RBP9.65□□□□□ -0.86
HLA-DOB-209ENST00000488325 TRAV40A0A0B4J280 105 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 IGSF23A1L1A6 192 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 SLC25A17O43808 307 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 TPT1P13693 172 aaKnown RBP9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 MAS1LP35410 378 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 SAA4P35542 130 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 SULT1A1P50225 295 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 HBG1P69891 147 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 HBG2P69892 147 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 HES1Q14469 280 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 PSG5Q15238 335 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 SPANXN5Q5MJ07 72 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 TEX261Q6UWH6 196 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 MRPL41Q8IXM3 137 aaKnown RBP9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 OR1L8Q8NGR8 309 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 ST8SIA2Q92186 375 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 KRTAP17-1Q9BYP8 105 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 KIAA1456Q9P272 454 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 U3KQ87 197 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 BIRC6Q9NR09 4857 aa9.64□□□□□ -0.87
HLA-DOB-209ENST00000488325 A0A1W2PN81 502 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 H3BP45 60 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 DFFBO76075 338 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 JTBO76095 146 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 ACTL6BO94805 426 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 TMEM50AO95807 157 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 IGKV1D-33P01593 117 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 IGKV1-33P01594 117 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 SNRNP70P08621 437 aaKnown RBP9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 CHRNA7P36544 502 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 F2RL1P55085 397 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 BPIFB3P59826 476 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 PRCDQ00LT1 54 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 EBI3Q14213 229 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 ZNF266Q14584 549 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 PLGLAQ15195 96 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 THNSL2Q86YJ6 484 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 STPG2Q8N412 459 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 STOML3Q8TAV4 291 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 PHYHIPLQ96FC7 376 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 PLEKHA3Q9HB20 300 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 ESM1Q9NQ30 184 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 HEYLQ9NQ87 328 aaPredicted RBP9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 UBQLN2Q9UHD9 624 aa9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 PAIP2BQ9ULR5 123 aaKnown RBP9.63□□□□□ -0.87
HLA-DOB-209ENST00000488325 TEX50A0A1B0GTY4 177 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 RRHO14718 337 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 NBR2O15453 112 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 CRYGBP07316 175 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 FAM106CPP0CH98 169 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 VDAC2P45880 294 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 ATP5IP56385 69 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 RAB11AP62491 216 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 NHLH2Q02577 135 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 TMEM267Q0VDI3 215 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 MMDQ15546 238 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 PRSS8Q16651 343 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 SPINK9Q5DT21 86 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 EIF5AL1Q6IS14 154 aaKnown RBP9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 TMEM14EPQ6UXP3 125 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 ZNF680Q8NEM1 530 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 EAF1Q96JC9 268 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 HINT2Q9BX68 163 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 SMIM3Q9BZL3 60 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 ZNF430Q9H8G1 570 aaPredicted RBP9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 CYTL1Q9NRR1 136 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 C1RLQ9NZP8 487 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 METTL1Q9UBP6 276 aaKnown RBP9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 SIGLEC9Q9Y336 463 aa9.62□□□□□ -0.87
HLA-DOB-209ENST00000488325 CST7O76096 145 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 NDUFA3O95167 84 aa9.61□□□□□ -0.87
HLA-DOB-209ENST00000488325 IFNA10P01566 189 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms