RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 ZNF471Q9BX82 626 aaPredicted RBP6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 RIMS4Q9H426 269 aaPredicted RBP6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 PITPNC1Q9UKF7 332 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 VSIG4Q9Y279 399 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 MOB4Q9Y3A3 225 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 WNK1Q9H4A3 2382 aa6.16□□□□□ -1.42
NECTIN3-209ENST00000488016 IGKV1D-13A0A0B4J2D9 117 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 C13orf42A0A1B0GVH6 325 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 NCBP2LA6PVI3 153 aaKnown RBP6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 MPTX1A8MV57 137 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 FAM25EA8MYX2 175 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 OOSP1A8MZH6 123 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 FGF16O43320 207 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 JTBO76095 146 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 CTSDP07339 412 aaPredicted RBP6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 CTXN2P0C2S0 81 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 FAM106CPP0CH98 169 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 IGKV1-13P0DP09 117 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 UCP3P55916 312 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 RPL15P61313 204 aaKnown RBP6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 DEFA6Q01524 100 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 TMEM30BQ3MIR4 351 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 Q3ZCU0 254 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 FAM122CQ6P4D5 195 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 IL34Q6ZMJ4 242 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 COMMD1Q8N668 190 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 C5orf56Q8N8D9 126 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 ZNF383Q8NA42 475 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 OR4A4PQ8NGN8 299 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 OR1S1Q8NH92 325 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 MARCH1Q8TCQ1 289 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 SEC22AQ96IW7 307 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 AQP10Q96PS8 301 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 CITED1Q99966 193 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 HSPB9Q9BQS6 159 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 AIFM2Q9BRQ8 373 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 PRSS22Q9GZN4 317 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 OR2D2Q9H210 308 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 RAB9BQ9NP90 201 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 NECAP2Q9NVZ3 263 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 MBD2Q9UBB5 411 aa6.15□□□□□ -1.42
NECTIN3-209ENST00000488016 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 M0R1X1 148 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 SPDEFO95238 335 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 GPR12P47775 334 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 RAB5CP51148 216 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 ARHGDIBP52566 201 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 SRPXP78539 464 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 EBI3Q14213 229 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 KIR2DS1Q14954 304 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 NSUN5P1Q3KNT7 163 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 TCTEX1D4Q5JR98 221 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 IGFL4Q6B9Z1 124 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 ZNF329Q86UD4 541 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 THNSL2Q86YJ6 484 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 H1FOOQ8IZA3 346 aaPredicted RBP6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 SPAG16Q8N0X2 631 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 Q8N2B8 174 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 Q8N9W7 124 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 CCDC71LQ8N9Z2 235 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 OR2T10Q8NGZ9 312 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 OR10J5Q8NHC4 309 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 WIPF2Q8TF74 440 aaPredicted RBP6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 CASTOR1Q8WTX7 329 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 C16orf92Q96LL3 132 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 S1PR3Q99500 378 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 RTBDNQ9BSG5 229 aaPredicted RBP6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 RNF126Q9BV68 326 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 DNAH9Q9NYC9 4486 aa6.14□□□□□ -1.43
NECTIN3-209ENST00000488016 PLXNB1O43157 2135 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 A0A1B0GUS0 222 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 LOC105371267A0A1B0GV96 52 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 LINC00473A8K010 186 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 H0YJW9 148 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 RAB29O14966 203 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 MOSP00540 346 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 IGKV1-16P04430 117 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 PGAM2P15259 253 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 AADACP22760 399 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 CD1BP29016 333 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 S100GP29377 79 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 RPL30P62888 115 aaKnown RBP6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 NDPQ00604 133 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 IL15RAQ13261 267 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 MMDQ15546 238 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 GAGE13Q4V321 117 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 OR2B11Q5JQS5 317 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 Q6ZS49 121 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 C18orf65Q6ZTR6 163 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 SVBPQ8N300 66 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 FAM71E2Q8N5Q1 922 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 LRTM2Q8N967 370 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 DCUN1D4Q92564 292 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 GALNT14Q96FL9 552 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 CLCC1Q96S66 551 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 CITED2Q99967 270 aaPredicted RBP6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 FBXL15Q9H469 300 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 SMDT1Q9H4I9 107 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 C5orf66Q9H5L9 145 aa6.13□□□□□ -1.43
NECTIN3-209ENST00000488016 EHFQ9NZC4 300 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms