RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 POU2AF1Q16633 256 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 TM4SF20Q53R12 229 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 THOC7Q6I9Y2 204 aaKnown RBP6.37□□□□□ -1.39
PRKCB-208ENST00000487674 RBPMS2Q6ZRY4 209 aaKnown RBP6.37□□□□□ -1.39
PRKCB-208ENST00000487674 ZNF502Q8TBZ5 544 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 TMEM190Q8WZ59 177 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 SPAG8Q99932 426 aaPredicted RBP6.37□□□□□ -1.39
PRKCB-208ENST00000487674 KRTAP4-2Q9BYR5 136 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 COMMD5Q9GZQ3 224 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 CCL28Q9NRJ3 127 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 THYN1Q9P016 225 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 MRPL27Q9P0M9 148 aaKnown RBP6.37□□□□□ -1.39
PRKCB-208ENST00000487674 TP53TG1Q9Y2A0 90 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 RRP15Q9Y3B9 282 aaKnown RBP6.37□□□□□ -1.39
PRKCB-208ENST00000487674 UFC1Q9Y3C8 167 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 ETV7Q9Y603 341 aa6.37□□□□□ -1.39
PRKCB-208ENST00000487674 A0A0A6YYH2 397 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 CXorf65A6NEN9 183 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 NUPR2A6NF83 97 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 A6NJ64 397 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 SULT1C2O00338 296 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 UPK2O00526 184 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 HPRT1P00492 218 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 NQO2P16083 231 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 PTBP1P26599 531 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRKCB-208ENST00000487674 APOC4P55056 127 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 ZNF585BQ52M93 769 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 PLET1Q6UQ28 207 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 Q6ZWC4 215 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 HSD17B13Q7Z5P4 300 aaPredicted RBP6.36□□□□□ -1.39
PRKCB-208ENST00000487674 HOGA1Q86XE5 327 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 WFDC3Q8IUB2 231 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 SLC38A6Q8IZM9 456 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 OR2C3Q8N628 320 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 GVQW1Q8N7I0 195 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 GDPD1Q8N9F7 314 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 CD300LFQ8TDQ1 290 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 VN1R17PQ8TDU5 208 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 BORCS5Q969J3 196 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 SLC25A38Q96DW6 304 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 QTRT1Q9BXR0 403 aaKnown RBP6.36□□□□□ -1.39
PRKCB-208ENST00000487674 ZNF436Q9C0F3 470 aaPredicted RBP6.36□□□□□ -1.39
PRKCB-208ENST00000487674 SLC5A7Q9GZV3 580 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 C5orf66Q9H5L9 145 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 PLEKHA2Q9HB19 425 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 DAZ1Q9NQZ3 744 aaKnown RBP6.36□□□□□ -1.39
PRKCB-208ENST00000487674 TMEM140Q9NV12 185 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 COMMD9Q9P000 198 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 RAB26Q9ULW5 256 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 SSR3Q9UNL2 185 aa6.36□□□□□ -1.39
PRKCB-208ENST00000487674 TRAV18A0A075B6X5 111 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 TRAV3A0A0B4J244 114 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 IGHV3-35A0A0C4DH35 117 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 TSPAN4O14817 238 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 TGOLN2O43493 480 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 PTHLHP12272 177 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 ATF4P18848 351 aaPredicted RBP6.35□□□□□ -1.39
PRKCB-208ENST00000487674 SDC2P34741 201 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 BMI1P35226 326 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 FXYD4P59646 89 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 TNFRSF9Q07011 255 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 PMS2P11Q13670 270 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 AADACL3Q5VUY0 350 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 SPSB3Q6PJ21 355 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 ZNF818PQ6ZRF7 136 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 LYG2Q86SG7 212 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 TMEM17Q86X19 198 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 SPARTQ8N0X7 666 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 DMBX1Q8NFW5 382 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 OR51H1Q8NH63 302 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 BSCL2Q96G97 398 aaPredicted RBP6.35□□□□□ -1.39
PRKCB-208ENST00000487674 ATP6V0BQ99437 205 aa6.35□□□□□ -1.39
PRKCB-208ENST00000487674 PLECQ15149 4684 aaKnown RBP6.35□□□□□ -1.39
PRKCB-208ENST00000487674 KIR2DL5BA0A0G2JN68 375 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 KIR2DL5BA0A0G2JPC4 375 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 A0A0J9YWU9 116 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 OR2T8A6NH00 312 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 MARCH11A6NNE9 402 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 UBE2CO00762 179 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 SPRY2O43597 315 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 S1PR2O95136 353 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 LY6G6CO95867 125 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 SERPINE2P07093 398 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 TRAPPC2P0DI81 140 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 TRAPPC2BP0DI82 140 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 OR13C7P0DN81 318 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 CBX5P45973 191 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 HERV-K104P61576 105 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 ERVK-16P61578 105 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 MXD1Q05195 221 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 WT1-ASQ06250 92 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 DEFB135Q30KP9 77 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 ODF3L2Q3SX64 289 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 IDNKQ5T6J7 187 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 LAMTOR1Q6IAA8 161 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 ZNF773Q6PK81 442 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 KIR2DL5AQ8N109 375 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 OR5AP2Q8NGF4 316 aa6.34□□□□□ -1.39
PRKCB-208ENST00000487674 OR10W1Q8NGF6 305 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms