RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 IGHG4P01861 327 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 MECP2P51608 486 aaKnown RBP8.35□□□□□ -1.07
TOP3B-216ENST00000487485 RAB25P57735 213 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 DHRS2Q13268 280 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 C2orf68Q2NKX9 166 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 C19orf54Q5BKX5 351 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 TCTEX1D4Q5JR98 221 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 ASPHD1Q5U4P2 390 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 PLET1Q6UQ28 207 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 Q6ZRM9 215 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 COMMD1Q8N668 190 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 OR4X2Q8NGF9 303 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 OR52B4Q8NGK2 314 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 OR1L8Q8NGR8 309 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 GPR146Q96CH1 333 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 QTRT1Q9BXR0 403 aaKnown RBP8.35□□□□□ -1.07
TOP3B-216ENST00000487485 PALMDQ9NP74 551 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 TMEM14BQ9NUH8 114 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 SHPKQ9UHJ6 478 aa8.35□□□□□ -1.07
TOP3B-216ENST00000487485 FOXA2Q9Y261 457 aaPredicted RBP8.35□□□□□ -1.07
TOP3B-216ENST00000487485 COL7A1Q02388 2944 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 A0A1B0GW64 132 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 DUXBA0A1W2PPF3 345 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 SOX15O60248 233 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 DUS4LO95620 317 aaKnown RBP8.34□□□□□ -1.07
TOP3B-216ENST00000487485 IGLV1-40P01703 118 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 TRAPPC2P0DI81 140 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 TRAPPC2BP0DI82 140 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 HSPE1P61604 102 aaKnown RBP8.34□□□□□ -1.07
TOP3B-216ENST00000487485 CD83Q01151 205 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 DCTN2Q13561 401 aaKnown RBP8.34□□□□□ -1.07
TOP3B-216ENST00000487485 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 ZNF429Q86V71 674 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 OR5M8Q8NGP6 311 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 COQ8AQ8NI60 647 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 CITED2Q99967 270 aaPredicted RBP8.34□□□□□ -1.07
TOP3B-216ENST00000487485 HINT2Q9BX68 163 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 NDUFA4L2Q9NRX3 87 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.34□□□□□ -1.07
TOP3B-216ENST00000487485 ZNF257Q9Y2Q1 563 aa8.34□□□□□ -1.07
TOP3B-216ENST00000487485 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 INMT-MINDY4F8WBC2 141 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 ST8SIA3O43173 380 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 RPLP1P05386 114 aaKnown RBP8.33□□□□□ -1.08
TOP3B-216ENST00000487485 ELANEP08246 267 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 HOXB5P09067 269 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 PF4V1P10720 104 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 SPNP16150 400 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 PSMB8P28062 276 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 FOXE3Q13461 319 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 CXorf66Q5JRM2 361 aaPredicted RBP8.33□□□□□ -1.08
TOP3B-216ENST00000487485 TMEM65Q6PI78 240 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 LCNL1Q6ZST4 164 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 TTC9CQ8N5M4 171 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 OR10W1Q8NGF6 305 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 OR5B3Q8NH48 314 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 MITD1Q8WV92 249 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 MS4A10Q96PG2 267 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 SEC22CQ9BRL7 303 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 MARVELD1Q9BSK0 173 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 PDCD10Q9BUL8 212 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 KLK15Q9H2R5 256 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 ZNF355PQ9NSJ1 428 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 CACNG5Q9UF02 275 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 TMED3Q9Y3Q3 217 aa8.33□□□□□ -1.08
TOP3B-216ENST00000487485 PTTG1O95997 202 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 DHFRP00374 187 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 IFNA17P01571 189 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 IL5P05113 134 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 REG1AP05451 166 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 SULT1A3P0DMM9 295 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 SULT1A4P0DMN0 295 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 AREGP15514 252 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 PSMB6P28072 239 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 RAB9AP51151 201 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 SMCO1Q147U7 214 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 NMSQ5H8A3 153 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 KHDC1LQ5JSQ8 128 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 THOC7Q6I9Y2 204 aaKnown RBP8.32□□□□□ -1.08
TOP3B-216ENST00000487485 HSD17B13Q7Z5P4 300 aaPredicted RBP8.32□□□□□ -1.08
TOP3B-216ENST00000487485 RNF152Q8N8N0 203 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 ZNF431Q8TF32 576 aaPredicted RBP8.32□□□□□ -1.08
TOP3B-216ENST00000487485 SRSF8Q9BRL6 282 aaKnown RBP8.32□□□□□ -1.08
TOP3B-216ENST00000487485 ZFP57Q9NU63 452 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 COA4Q9NYJ1 87 aa8.32□□□□□ -1.08
TOP3B-216ENST00000487485 TSSC4Q9Y5U2 329 aaPredicted RBP8.32□□□□□ -1.08
TOP3B-216ENST00000487485 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 A0A1B0GU03 582 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 IGLC7A0M8Q6 106 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 NPIPB5A8MRT5 1133 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 H3BUA1 57 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 PRAF2O60831 178 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 ADAP1O75689 374 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 PRH1P02810 166 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 CRYGCP07315 174 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 OR13C7P0DN81 318 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 CTRB1P17538 263 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 PRCDQ00LT1 54 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms