RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CD300LFQ8TDQ1 290 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
VPS16-208ENST00000487461 COMMD5Q9GZQ3 224 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 PLEKHA2Q9HB19 425 aa9.12□□□□□ -0.95
VPS16-208ENST00000487461 XRCC3O43542 346 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 RFX2P48378 723 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 NEDD8Q15843 81 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 AADACL3Q5VUY0 350 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 PLET1Q6UQ28 207 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 GPR141Q7Z602 305 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 DMBX1Q8NFW5 382 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 OVOL2Q9BRP0 275 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 GGTLC1Q9BX51 225 aa9.11□□□□□ -0.95
VPS16-208ENST00000487461 QTRT1Q9BXR0 403 aaKnown RBP9.11□□□□□ -0.95
VPS16-208ENST00000487461 ZNF436Q9C0F3 470 aaPredicted RBP9.11□□□□□ -0.95
VPS16-208ENST00000487461 MRPL27Q9P0M9 148 aaKnown RBP9.11□□□□□ -0.95
VPS16-208ENST00000487461 LOC102724200A0A096LPH7 203 aaPredicted RBP9.1□□□□□ -0.95
VPS16-208ENST00000487461 TRAV25A0A0B4J276 109 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 TGOLN2O43493 480 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 PGLYRP1O75594 196 aaPredicted RBP9.1□□□□□ -0.95
VPS16-208ENST00000487461 JTBO76095 146 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 PMP2P02689 132 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 SERPINE2P07093 398 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 FGF2P09038 288 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 TRAPPC2P0DI81 140 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 TRAPPC2BP0DI82 140 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 OR13C7P0DN81 318 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 TGFBR1P36897 503 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 MFAP2P55001 183 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 WT1-ASQ06250 92 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 ANKRD55Q3KP44 614 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 SLC25A24Q6NUK1 477 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 RBPMS2Q6ZRY4 209 aaKnown RBP9.1□□□□□ -0.95
VPS16-208ENST00000487461 VN1R17PQ8TDU5 208 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 MARC2Q969Z3 335 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 S100A16Q96FQ6 103 aaKnown RBP9.1□□□□□ -0.95
VPS16-208ENST00000487461 NDUFA4L2Q9NRX3 87 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 EHFQ9NZC4 300 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 COMMD9Q9P000 198 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 THYN1Q9P016 225 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 ANAPC10Q9UM13 185 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 UFC1Q9Y3C8 167 aa9.1□□□□□ -0.95
VPS16-208ENST00000487461 IGHV3-21A0A0B4J1V1 117 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 OR2T8A6NH00 312 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 TMEM127O75204 238 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 F2RP25116 425 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 RPS19P39019 145 aaKnown RBP9.09□□□□□ -0.95
VPS16-208ENST00000487461 LPAR6P43657 344 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 ELLP55199 621 aaPredicted RBP9.09□□□□□ -0.95
VPS16-208ENST00000487461 HERV-K104P61576 105 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 GDPD1Q8N9F7 314 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 OR1L6Q8NGR2 347 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 OR1L8Q8NGR8 309 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 MOB3AQ96BX8 217 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 ZNF2Q9BSG1 426 aaPredicted RBP9.09□□□□□ -0.95
VPS16-208ENST00000487461 C5orf66Q9H5L9 145 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 IFT46Q9NQC8 304 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 NSG2Q9Y328 171 aa9.09□□□□□ -0.95
VPS16-208ENST00000487461 HYDINQ4G0P3 5121 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 CCDC160A6NGH7 325 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 MARCH11A6NNE9 402 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 KRASP01116 189 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 RLN1P04808 185 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 NAT1P18440 290 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 THOC7Q6I9Y2 204 aaKnown RBP9.08□□□□□ -0.96
VPS16-208ENST00000487461 LYSMD2Q8IV50 215 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 CROCCP3Q8IVE0 287 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 OR2C3Q8N628 320 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 FCAMRQ8WWV6 532 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 BORCS5Q969J3 196 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 CHRDL1Q9BU40 450 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 HINT2Q9BX68 163 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 KRTAP17-1Q9BYP8 105 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 OR51B2Q9Y5P1 312 aa9.08□□□□□ -0.96
VPS16-208ENST00000487461 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
VPS16-208ENST00000487461 CYB5BO43169 146 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 ADMP35318 185 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 G6PCP35575 357 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 TMBIM6P55061 237 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 TAS2R20P59543 309 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 ERVK-16P61578 105 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 UBE2NLQ5JXB2 153 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 HSD17B13Q7Z5P4 300 aaPredicted RBP9.07□□□□□ -0.96
VPS16-208ENST00000487461 SLC38A6Q8IZM9 456 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 CADM3Q8N126 398 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 SAMD12Q8N8I0 201 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 OR5H2Q8NGV7 314 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 SCARB1Q8WTV0 552 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 LSM10Q969L4 123 aaKnown RBP9.07□□□□□ -0.96
VPS16-208ENST00000487461 BSCL2Q96G97 398 aaPredicted RBP9.07□□□□□ -0.96
VPS16-208ENST00000487461 BCL7BQ9BQE9 202 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 UBQLN2Q9UHD9 624 aa9.07□□□□□ -0.96
VPS16-208ENST00000487461 F11RQ9Y624 299 aaKnown RBP9.07□□□□□ -0.96
VPS16-208ENST00000487461 PLECQ15149 4684 aaKnown RBP9.07□□□□□ -0.96
VPS16-208ENST00000487461 IGHV3OR16-8A0A075B7F1 116 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 DBX1A6NMT0 343 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 K7EIM0 57 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 TSPAN4O14817 238 aa9.06□□□□□ -0.96
VPS16-208ENST00000487461 SNAPC5O75971 98 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms