RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 DCHS1Q96JQ0 3298 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 TRAV39A0A0B4J263 110 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 IGKV1-9A0A0C4DH69 117 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 A0A1B0GTI1 187 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 A0A1B0GUH1 482 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 ISPDA4D126 451 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 FABP12A6NFH5 140 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 CD300LBA8K4G0 201 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 IQCF6A8MYZ5 107 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 M0R233 179 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RBFOX2O43251 390 aaKnown RBP eCLIP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 CTAG2O75638 210 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 OR7C1O76099 320 aaPredicted RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 MT-ND4P03905 459 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 CSN2P05814 226 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 CD3GP09693 182 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 UBBP0CG47 229 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RNASE2P10153 161 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 PTHLHP12272 177 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 GTF2F2P13984 249 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 CBR1P16152 277 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 HIST1H1DP16402 221 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 PRKACAP17612 351 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 SRMP19623 302 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 ETV6P41212 452 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RANBP1P43487 201 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 HAAOP46952 286 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RBP2P50120 134 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 PSMD7P51665 324 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RBM11P57052 281 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 AP3S2P59780 193 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 ARPC4P59998 168 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 SNRPD2P62316 118 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 GNG3P63215 75 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 MRPS10P82664 201 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 FAM3AP98173 230 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 PITPNAQ00169 270 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 BSPH1Q075Z2 132 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 EDDM3AQ14507 147 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RSU1Q15404 277 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 KISS1Q15726 138 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 IGFBP7Q16270 282 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 MOGQ16653 247 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 ZNF181Q2M3W8 571 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 SMIM21Q3B7S5 101 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RNASE10Q5GAN6 216 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 BEX5Q5H9J7 111 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 XKRXQ6PP77 449 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 FBXW12Q6X9E4 464 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 SLC25A26Q70HW3 274 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 OR2W3Q7Z3T1 314 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 TRAPPC6BQ86SZ2 158 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 NAA40Q86UY6 237 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 OSR2Q8N2R0 312 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 Q8N402 240 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 TOMM5Q8N4H5 51 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 ASCC1Q8N9N2 400 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 WDR31Q8NA23 367 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 CHST4Q8NCG5 386 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 OR2Z1Q8NG97 314 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 OR51T1Q8NGJ9 327 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 OR5L1Q8NGL2 311 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 OR4S2Q8NH73 311 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 KLF14Q8TD94 323 aaPredicted RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 MAFIPQ8WZ33 124 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RNASE6Q93091 150 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 CMBLQ96DG6 245 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 PIK3IP1Q96FE7 263 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RNF170Q96K19 258 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RARRES2Q99969 163 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 MICU1Q9BPX6 476 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 UQCC2Q9BRT2 126 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 BCL2L14Q9BZR8 327 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 FGF23Q9GZV9 251 aaPredicted RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 NXF2Q9GZY0 626 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 SLC22A4Q9H015 551 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 METTL9Q9H1A3 318 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 ZNF442Q9H7R0 627 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 C12orf4Q9NQ89 552 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RBFOX1Q9NWB1 397 aaKnown RBP2.02□□□□□ -2.09
LINC00888-204ENST00000487386 MCUBQ9NWR8 336 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 ING4Q9UNL4 249 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 RHBDD3Q9Y3P4 386 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 MPC1Q9Y5U8 109 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 NCOR2Q9Y618 2525 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 SPTBN2O15020 2390 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 ACACAQ13085 2346 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 MED12LQ86YW9 2145 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 DMDP11532 3685 aa2.02□□□□□ -2.09
LINC00888-204ENST00000487386 CACNA1AO00555 2505 aa2.01□□□□□ -2.09
LINC00888-204ENST00000487386 RIF1Q5UIP0 2472 aaKnown RBP2.01□□□□□ -2.09
LINC00888-204ENST00000487386 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
LINC00888-204ENST00000487386 PTPRZ1P23471 2315 aaPredicted RBP2.01□□□□□ -2.09
LINC00888-204ENST00000487386 CFAP47Q6ZTR5 3102 aa2.01□□□□□ -2.09
LINC00888-204ENST00000487386 ANKRD11Q6UB99 2663 aaPredicted RBP2.01□□□□□ -2.09
LINC00888-204ENST00000487386 CEP295Q9C0D2 2601 aa2.01□□□□□ -2.09
LINC00888-204ENST00000487386 IGKV1-27A0A075B6S5 117 aa2.01□□□□□ -2.09
LINC00888-204ENST00000487386 A0A0A6YYH2 397 aa2.01□□□□□ -2.09
LINC00888-204ENST00000487386 PQLC2LA1A4F0 135 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms