RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 OR5B3Q8NH48 314 aa14.33□□□□□ -0.12
SMPDL3A-202ENST00000487215 VN1R17PQ8TDU5 208 aa14.33□□□□□ -0.12
SMPDL3A-202ENST00000487215 RHBDL2Q9NX52 303 aa14.33□□□□□ -0.12
SMPDL3A-202ENST00000487215 ETV7Q9Y603 341 aa14.33□□□□□ -0.12
SMPDL3A-202ENST00000487215 A0A0A6YYH2 397 aa14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 OR2T8A6NH00 312 aa14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 A6NJ64 397 aa14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 SSX5O60225 188 aa14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 ARPC4P59998 168 aa14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 MSMO1Q15800 293 aa14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 LGALS14Q8TCE9 139 aa14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 SRSF8Q9BRL6 282 aaKnown RBP14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 CCL28Q9NRJ3 127 aa14.32□□□□□ -0.12
SMPDL3A-202ENST00000487215 UPK2O00526 184 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 CTSDP07339 412 aaPredicted RBP14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 TAS2R31P59538 309 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 NANOS2P60321 138 aaKnown RBP14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 PRR20EP86478 221 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 PRR20CP86479 221 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 PRR20DP86480 221 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 PRR20BP86481 221 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 PRR20AP86496 221 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 APRG1Q8IVJ8 170 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 ZBTB34Q8NCN2 500 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 OR10W1Q8NGF6 305 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 SECTM1Q8WVN6 248 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 COMMD5Q9GZQ3 224 aa14.31□□□□□ -0.12
SMPDL3A-202ENST00000487215 IGHV3OR16-8A0A075B7F1 116 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 NDUFA4O00483 81 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 RBFOX2O43251 390 aaKnown RBP eCLIP14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 TMEM127O75204 238 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 SDC2P34741 201 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 POU2AF1Q16633 256 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 GDPD1Q8N9F7 314 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 BEST4Q8NFU0 473 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 OR13F1Q8NGS4 319 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 CD300LFQ8TDQ1 290 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 BSCL2Q96G97 398 aaPredicted RBP14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 CHRDL1Q9BU40 450 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 C20orf24Q9BUV8 137 aa14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 QTRT1Q9BXR0 403 aaKnown RBP14.3□□□□□ -0.12
SMPDL3A-202ENST00000487215 SULT1C2O00338 296 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 ZNF207O43670 478 aaKnown RBP14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 HPRT1P00492 218 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 PTHLHP12272 177 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 NQO2P16083 231 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 ZNF124Q15973 351 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 ZNF773Q6PK81 442 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 C11orf45Q8TAV5 145 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 GATAD1Q8WUU5 269 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 RARRES2Q99969 163 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 C6orf62Q9GZU0 229 aaPredicted RBP14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 MFFQ9GZY8 342 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 CSTL1Q9H114 145 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 DIABLOQ9NR28 239 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 TMEM140Q9NV12 185 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 FBXL17Q9UF56 701 aa14.29□□□□□ -0.12
SMPDL3A-202ENST00000487215 TRAV18A0A075B6X5 111 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 IGHV3-21A0A0B4J1V1 117 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 MPTX1A8MV57 137 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 K7EMT4 169 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 CYB5BO43169 146 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 ATP6V1G2O95670 118 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 FCGR2CP31995 323 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 MXD1Q05195 221 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 WT1-ASQ06250 92 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 RBMS2Q15434 407 aaKnown RBP14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 IDNKQ5T6J7 187 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 SLC25A24Q6NUK1 477 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 SPSB3Q6PJ21 355 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 DNAH6Q9C0G6 4158 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 C11orf68Q9H3H3 251 aaKnown RBP14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 C21orf62Q9NYP8 219 aa14.28□□□□□ -0.12
SMPDL3A-202ENST00000487215 F8W735 103 aaPredicted RBP14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 PPYP01298 95 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 IFNA4P05014 189 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 SERPINE2P07093 398 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 FGF2P09038 288 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 OR13C7P0DN81 318 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 ADMP35318 185 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 CBX5P45973 191 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 MFAP2P55001 183 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 CATR1Q13166 79 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 THOC7Q6I9Y2 204 aaKnown RBP14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 HOGA1Q86XE5 327 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 BORCS5Q969J3 196 aa14.27□□□□□ -0.13
SMPDL3A-202ENST00000487215 LOC100506127A0A0U1RQW1 187 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 C15orf62A8K5M9 175 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 TRAPPC2P0DI81 140 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 TRAPPC2BP0DI82 140 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 HSD17B13Q7Z5P4 300 aaPredicted RBP14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 CROCCP3Q8IVE0 287 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 DMBX1Q8NFW5 382 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 OR11H2Q8NH07 326 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 SCARB1Q8WTV0 552 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 ATP6V0BQ99437 205 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 RNF2Q99496 336 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 SLC5A7Q9GZV3 580 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 SMPXQ9UHP9 88 aa14.26□□□□□ -0.13
SMPDL3A-202ENST00000487215 TEX50A0A1B0GTY4 177 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms