RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 ZNF430Q9H8G1 570 aaPredicted RBP6.89□□□□□ -1.31
NUDCD3-209ENST00000487118 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
NUDCD3-209ENST00000487118 NDUFA4L2Q9NRX3 87 aa6.89□□□□□ -1.31
NUDCD3-209ENST00000487118 SIGLEC9Q9Y336 463 aa6.89□□□□□ -1.31
NUDCD3-209ENST00000487118 AUP1Q9Y679 476 aa6.89□□□□□ -1.31
NUDCD3-209ENST00000487118 FN1P02751 2386 aaKnown RBP6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 CGB1A6NKQ9 187 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 J3QLI3 93 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 HAX1O00165 279 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 RRHO14718 337 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 MOSP00540 346 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 IGKV1D-33P01593 117 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 IGKV1-33P01594 117 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 HOXA1P49639 335 aaPredicted RBP6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 ATP5IP56385 69 aaPredicted RBP6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 HBG1P69891 147 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 HBG2P69892 147 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 CLINT1Q14677 625 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 ATP6V1FQ16864 119 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 BSXQ3C1V8 233 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 EIF5AL1Q6IS14 154 aaKnown RBP6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 PIP4P2Q8N4L2 257 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 TMEM217Q8N7C4 229 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 OR2T10Q8NGZ9 312 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 TMEM170AQ8WVE7 144 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 EAF1Q96JC9 268 aaPredicted RBP6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 PARD6GQ9BYG4 376 aaPredicted RBP6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 COMMD5Q9GZQ3 224 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 SLC25A32Q9H2D1 315 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 PLEKHA3Q9HB20 300 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 ENY2Q9NPA8 101 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 HEYLQ9NQ87 328 aaPredicted RBP6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 HIF1ANQ9NWT6 349 aa6.88□□□□□ -1.31
NUDCD3-209ENST00000487118 A0A1B0GW64 132 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 A0A1W2PN81 502 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 LINC00862A6NCI5 91 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 RNF223E7ERA6 249 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 NBR2O15453 112 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 FGF16O43320 207 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 SNRNP70P08621 437 aaKnown RBP6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 NMBP08949 121 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 OR8U8P0C7N1 319 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 SEC11BP0C7V7 166 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 IGHV4-31P0DP07 118 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 SPP1P10451 314 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 NPY1RP25929 384 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 CHRNA7P36544 502 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 RAB14P61106 215 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 SLC38A11Q08AI6 406 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 PJVKQ0ZLH3 352 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 VWC2Q2TAL6 325 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 FBLN7Q53RD9 439 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 PPP1R27Q86WC6 154 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 SLC24A4Q8NFF2 622 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 OR10P1Q8NGE3 313 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 LRRC20Q8TCA0 184 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 TMED6Q8WW62 240 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 Q96MF0 132 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 TMEM147Q9BVK8 224 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 FBXL15Q9H469 300 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 PLA2G2EQ9NZK7 142 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 METTL1Q9UBP6 276 aaKnown RBP6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 ARID1AO14497 2285 aa6.87□□□□□ -1.31
NUDCD3-209ENST00000487118 ANK3Q12955 4377 aaKnown RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 TET2Q6N021 2002 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 TRAV40A0A0B4J280 105 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 E7EUB6 86 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 IFNA10P01566 189 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 OPN1MWP04001 364 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 FAM157CP0CG43 387 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 OPN1MW2P0DN77 364 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 OPN1MW3P0DN78 364 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 RNASE2P10153 161 aaKnown RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 PAX6P26367 422 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 ATP6V0CP27449 155 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 BRS3P32247 399 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 RPL27AP46776 148 aaKnown RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 COMPP49747 757 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 SULT1A2P50226 295 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 F2RL1P55085 397 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 RAB11AP62491 216 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 DLK1P80370 383 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 SSBP2P81877 361 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 MMDQ15546 238 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 LRRC75BQ2VPJ9 315 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 TMEM249Q2WGJ8 235 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 C2orf83Q53S99 150 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 KLF17Q5JT82 389 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 FAM74A1Q5RGS3 127 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 C10orf55Q5SWW7 151 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 RUSC1-AS1Q66K80 236 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 OR8G2PQ6IF36 304 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 ETV3LQ6ZN32 361 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 LILRB2Q8N423 598 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 GNPNAT1Q96EK6 184 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 SRSF8Q9BRL6 282 aaKnown RBP6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 GGACTQ9BVM4 153 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms