RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 IFNA17P01571 189 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 NKX2-1P43699 371 aaPredicted RBP7.53□□□□□ -1.2
MCF2L-227ENST00000486806 VDAC2P45880 294 aaPredicted RBP7.53□□□□□ -1.2
MCF2L-227ENST00000486806 CYCSP99999 105 aaKnown RBP7.53□□□□□ -1.2
MCF2L-227ENST00000486806 CFHR3Q02985 330 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 WT1-ASQ06250 92 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 SPINK9Q5DT21 86 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 C9orf152Q5JTZ5 239 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 C11orf87Q6NUJ2 197 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 PRIMA1Q86XR5 153 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 OR10W1Q8NGF6 305 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 DTD1Q8TEA8 209 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 TAF15Q92804 592 aaKnown RBP eCLIP7.53□□□□□ -1.2
MCF2L-227ENST00000486806 C11orf1Q9H5F2 150 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 C16orf95Q9H693 158 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 SERTAD4Q9NUC0 356 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 GSKIPQ9P0R6 139 aa7.53□□□□□ -1.2
MCF2L-227ENST00000486806 A0A1W2PN81 502 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 NPIPB5A8MRT5 1133 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 G3V3Q6 166 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 K7EPK0 472 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 SYNGR2O43760 224 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 SCGB1D2O95969 90 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 AREGP15514 252 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 CHRNA7P36544 502 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 HOXA1P49639 335 aaPredicted RBP7.52□□□□□ -1.21
MCF2L-227ENST00000486806 POLR2GP62487 172 aaKnown RBP eCLIP7.52□□□□□ -1.21
MCF2L-227ENST00000486806 RAB32Q13637 225 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 ECSCRQ19T08 205 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 BSXQ3C1V8 233 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 AKIRIN2Q53H80 203 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 HSD17B13Q7Z5P4 300 aaPredicted RBP7.52□□□□□ -1.21
MCF2L-227ENST00000486806 LURAP1LQ8IV03 231 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 STPG2Q8N412 459 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 ZNF114Q8NC26 417 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 LFNGQ8NES3 379 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 OR2T6Q8NHC8 308 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 ABHD5Q8WTS1 349 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 PPP1R1CQ8WVI7 109 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 TMEM68Q96MH6 324 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 NOL4LQ96MY1 436 aaPredicted RBP7.52□□□□□ -1.21
MCF2L-227ENST00000486806 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 MAGT1Q9H0U3 335 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 RBKSQ9H477 322 aa7.52□□□□□ -1.21
MCF2L-227ENST00000486806 NF1P21359 2839 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 TRAV14DV4A0A0A6YYC5 116 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 TRAV41A0A0B4J266 112 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 CEBPZOSA8MTT3 80 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 G3V318 75 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 H0YIZ8 118 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 SSSCA1O60232 199 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 SOX15O60248 233 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 MED6O75586 246 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 DEDDO75618 318 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 TMEM50AO95807 157 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 CRYBA1P05813 215 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 CRYGCP07315 174 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 APELAP0DMC3 54 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 HKR1P10072 659 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 CTRB1P17538 263 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 PSMB6P28072 239 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 PPIFP30405 207 aaKnown RBP7.51□□□□□ -1.21
MCF2L-227ENST00000486806 S100A10P60903 97 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 RAP2BP61225 183 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 CD83Q01151 205 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 KLK9Q2XQG4 91 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 PVRIGQ6DKI7 326 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 CTRB2Q6GPI1 263 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 TTC9CQ8N5M4 171 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 OR2C3Q8N628 320 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 LINC01006Q8NI28 216 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 FAM110DQ8TAY7 271 aaPredicted RBP7.51□□□□□ -1.21
MCF2L-227ENST00000486806 WIPF2Q8TF74 440 aaPredicted RBP7.51□□□□□ -1.21
MCF2L-227ENST00000486806 ST6GAL2Q96JF0 529 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 HINT2Q9BX68 163 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 ZFP57Q9NU63 452 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 LINC00527Q9UJ94 153 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 KLK9Q9UKQ9 250 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 DMRT1Q9Y5R6 373 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 WSB1Q9Y6I7 421 aa7.51□□□□□ -1.21
MCF2L-227ENST00000486806 FBXO24O75426 580 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 BRI3O95415 125 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 MPC2O95563 127 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 LY86O95711 162 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 REG1AP05451 166 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 PET100P0DJ07 73 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 OR13C7P0DN81 318 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 IAPPP10997 89 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 LYL1P12980 280 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 PAX9P55771 341 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 LRRC37A5PQ49AS3 106 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 UNQ5815/PRO19632Q6UWF5 114 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 C19orf35Q6ZS72 473 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 MRPL41Q8IXM3 137 aaKnown RBP7.5□□□□□ -1.21
MCF2L-227ENST00000486806 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.5□□□□□ -1.21
MCF2L-227ENST00000486806 TMEM170AQ8WVE7 144 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 CIB3Q96Q77 187 aaPredicted RBP7.5□□□□□ -1.21
MCF2L-227ENST00000486806 RAB40CQ96S21 281 aa7.5□□□□□ -1.21
MCF2L-227ENST00000486806 RANGRFQ9HD47 186 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms