RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 SSR4P51571 173 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 NXPH1P58417 271 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 RPL8P62917 257 aaKnown RBP8.8□□□□□ -1
CCDC171-208ENST00000486641 PSG5Q15238 335 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 ZC2HC1AQ96GY0 325 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 SSBP3Q9BWW4 388 aaPredicted RBP8.8□□□□□ -1
CCDC171-208ENST00000486641 NPVFQ9HCQ7 196 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 ARL2-SNX15V9GYD0 113 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 KIAA0100Q14667 2235 aaKnown RBP8.8□□□□□ -1
CCDC171-208ENST00000486641 CIDEAO60543 219 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 VDAC2P45880 294 aaPredicted RBP8.8□□□□□ -1
CCDC171-208ENST00000486641 KLF5Q13887 457 aaPredicted RBP8.8□□□□□ -1
CCDC171-208ENST00000486641 NRN1LQ496H8 165 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 WDR86Q86TI4 376 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 TMEM70Q9BUB7 260 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 RARRES3Q9UL19 164 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 TRAV8-6A0A0B4J262 113 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 M0R1X1 148 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 PSPNO60542 156 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 GFRA3O60609 400 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 MRPL33O75394 65 aaKnown RBP8.79□□□□□ -1
CCDC171-208ENST00000486641 SAP30O75446 220 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 HBZP02008 142 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 ERVK11-1P61568 191 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 WIPI1Q5MNZ9 446 aaPredicted RBP8.79□□□□□ -1
CCDC171-208ENST00000486641 FAM71F2Q6NXP2 309 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 MRPL14Q6P1L8 145 aaKnown RBP8.79□□□□□ -1
CCDC171-208ENST00000486641 NHLRC2Q8NBF2 726 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 OR2Y1Q8NGV0 311 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 SARAFQ96BY9 339 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 SMIM12Q96EX1 92 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 ST20Q9HBF5 79 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 IGHV1-45A0A0A0MS14 117 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 IGHV3-43A0A0B4J1X8 118 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 SH2D7A6NKC9 451 aaPredicted RBP8.79□□□□□ -1
CCDC171-208ENST00000486641 CORTO00230 105 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 IGHV3-43DP0DP04 118 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 TEPPQ6URK8 271 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 VKORC1L1Q8N0U8 176 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 WDR31Q8NA23 367 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 OR2T6Q8NHC8 308 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 WIPF2Q8TF74 440 aaPredicted RBP8.79□□□□□ -1
CCDC171-208ENST00000486641 NINJ1Q92982 152 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 URB1-AS1Q96HZ7 61 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 IMMP1LQ96LU5 166 aa8.79□□□□□ -1
CCDC171-208ENST00000486641 SSBP4Q9BWG4 385 aaPredicted RBP8.79□□□□□ -1
CCDC171-208ENST00000486641 TET2Q6N021 2002 aaPredicted RBP8.78□□□□□ -1
CCDC171-208ENST00000486641 CACNA1DQ01668 2161 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 COL6A3P12111 3177 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 DEFB108AA8MXU0 73 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 MFAP2P55001 183 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 AESQ08117 197 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 PRR31Q5SQ13 230 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 SLC25A34Q6PIV7 304 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 SYT13Q7L8C5 426 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 OR4A16Q8NH70 328 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 ZNF503Q96F45 646 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 IGF2BP2-AS1Q96M15 143 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 HCFC1P51610 2035 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 FRYQ5TBA9 3013 aa8.78□□□□□ -1
CCDC171-208ENST00000486641 TRAV3A0A0B4J244 114 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 GGTLC3B5MD39 225 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 CD5LO43866 347 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 PPOXP50336 477 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 ZNF146Q15072 292 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 FAM120AOSQ5T036 256 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 PRAMEF5Q5TYX0 476 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 PRAMEF6Q5VXH4 476 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 C12orf54Q6X4T0 127 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 LINC00173Q6ZV60 143 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 WFDC8Q8IUA0 241 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 TSTD1Q8NFU3 115 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 SAP30LQ9HAJ7 183 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 GCM1Q9NP62 436 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 PSG11Q9UQ72 335 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 SDK1Q7Z5N4 2213 aa8.77□□□□□ -1
CCDC171-208ENST00000486641 LOC102723996A0A087X1L8 192 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 TMEM30CPA0ZSE6 113 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 OOEPA6NGQ2 149 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 C21orf140B9A014 251 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 J3QR06 171 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 CRXO43186 299 aaPredicted RBP8.77□□□□□ -1.01
CCDC171-208ENST00000486641 FCGR3BO75015 233 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 NBEAP1P0C6P0 100 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 IGLC1P0CG04 106 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 IGFBP2P18065 325 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 FOXF2Q12947 444 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 RASL11AQ6T310 242 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 ZNF841Q6ZN19 808 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 RPS19BP1Q86WX3 136 aaKnown RBP8.77□□□□□ -1.01
CCDC171-208ENST00000486641 NUP35Q8NFH5 326 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 Q8TCH9 128 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 HSD17B10Q99714 261 aaKnown RBP8.77□□□□□ -1.01
CCDC171-208ENST00000486641 COMMD5Q9GZQ3 224 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 TMEM167BQ9NRX6 74 aa8.77□□□□□ -1.01
CCDC171-208ENST00000486641 A0A087X0K7 114 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 HSBP1L1C9JCN9 74 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 HAND1O96004 215 aa8.76□□□□□ -1.01
CCDC171-208ENST00000486641 P04436 131 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms