RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SNAPC5O75971 98 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 SERPINE2P07093 398 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 OR13C7P0DN81 318 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 FOLR2P14207 255 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 DEFB114Q30KQ6 69 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 CD300EQ496F6 205 aaPredicted RBP13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 TBC1D26Q86UD7 250 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 GTSCR1Q86UQ5 136 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 EXTL2Q9UBQ6 330 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 NSG2Q9Y328 171 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 OR51B2Q9Y5P1 312 aa13.94□□□□□ -0.18
PRPF40A-209ENST00000486100 TENM3Q9P273 2699 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 M0QYG6 137 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 CYB5BO43169 146 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 IFNA6P05013 189 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 PTBP1P26599 531 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 WT1-ASQ06250 92 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 GDPD1Q8N9F7 314 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 OR52I2Q8NH67 350 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 ZNF502Q8TBZ5 544 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 DYNLRB2Q8TF09 96 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 C15orf40Q8WUR7 153 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 TSC22D3Q99576 134 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 FKBP11Q9NYL4 201 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 TECRQ9NZ01 308 aaKnown RBP13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 PRNDQ9UKY0 176 aa13.93□□□□□ -0.18
PRPF40A-209ENST00000486100 ZNF785A8K8V0 405 aa13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 CBLN1P23435 193 aa13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 RNASE12Q5GAN4 147 aaKnown RBP13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 SLC25A24Q6NUK1 477 aa13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 VN1R17PQ8TDU5 208 aa13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 LSM10Q969L4 123 aaKnown RBP13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 ABHD1Q96SE0 405 aa13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 TM2D3Q9BRN9 247 aa13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 HINT2Q9BX68 163 aa13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 MTFP1Q9UDX5 166 aa13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 KMT2CQ8NEZ4 4911 aaKnown RBP13.92□□□□□ -0.18
PRPF40A-209ENST00000486100 ZNF320A2RRD8 509 aa13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 CD3DP04234 171 aa13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 EDN2P20800 178 aa13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 RNASE10Q5GAN6 216 aaKnown RBP13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 LAX1Q8IWV1 398 aa13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 OR5B3Q8NH48 314 aa13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 SEC22AQ96IW7 307 aa13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 TMEM56Q96MV1 263 aa13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 TUBA4BQ9H853 241 aa13.91□□□□□ -0.18
PRPF40A-209ENST00000486100 IGKV1-39P01597 117 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 IGKV1D-39P04432 117 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 TBPP20226 339 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 GPR183P32249 361 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 SPCS2Q15005 226 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 PLET1Q6UQ28 207 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 LHFPL1Q86WI0 220 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 ARRDC1Q8N5I2 433 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 ZNF486Q96H40 463 aaPredicted RBP13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 MIXL1Q9H2W2 232 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 ZC4H2Q9NQZ6 224 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 TMEM14BQ9NUH8 114 aa13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 F11RQ9Y624 299 aaKnown RBP13.9□□□□□ -0.18
PRPF40A-209ENST00000486100 TMEM213A2RRL7 107 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 DBX1A6NMT0 343 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 C15orf61A6NNL5 157 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 A8MWP6 167 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 CTDSP2O14595 271 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 RGS5O15539 181 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 PGAM2P15259 253 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 RPL5P46777 297 aaKnown RBP13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 MFAP2P55001 183 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 RND3P61587 244 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 H2BFWTQ7Z2G1 175 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 TMEM229BQ8NBD8 167 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 OR1L6Q8NGR2 347 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 SLC2A8Q9NY64 477 aa13.89□□□□□ -0.19
PRPF40A-209ENST00000486100 C3orf84H3BNL1 204 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 CD74P04233 296 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 CD81P60033 236 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 HAGHQ16775 308 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 CLVS1Q8IUQ0 354 aaPredicted RBP13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 UXS1Q8NBZ7 420 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 OR4A16Q8NH70 328 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 CACNG8Q8WXS5 425 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 ATP6V0BQ99437 205 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 NEURL2Q9BR09 285 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 PALMDQ9NP74 551 aa13.88□□□□□ -0.19
PRPF40A-209ENST00000486100 GABARAPH6UMI1 98 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 TGOLN2O43493 480 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 PI3P19957 117 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 PIGPP57054 158 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 TAS2R19P59542 299 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 GUCA2BQ16661 112 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 TM4SF20Q53R12 229 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 ZNF57Q68EA5 555 aaPredicted RBP13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 UNQ9165/PRO28630Q6UXU0 137 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 TERB2Q8NHR7 220 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 SCARB1Q8WTV0 552 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 RAB2BQ8WUD1 216 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 MARC2Q969Z3 335 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 MRGPRFQ96AM1 343 aa13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 ZNF436Q9C0F3 470 aaPredicted RBP13.87□□□□□ -0.19
PRPF40A-209ENST00000486100 IGHV3-35A0A0C4DH35 117 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms